Time to end the ridiculous Candida, SIBO and H Pylori myths.

bloated

 

Written by Lee Stevenson. Sorry I am not the best editor.

There are many myths that have been on the net for quite a while concerning candida, sibo and H Pylori. If you are suffering from them it is a symptom and an indication that other health problems need addressed. It is a case of good gone bad.

 

Candida and H Pylori are commensal that turn pathogenic when something goes wrong in the body.

https://academic.oup.com/femsyr/article/15/7/fov081/641997?fbclid=IwAR1jJrW1TcEbouOZtZC-8pJgZcNJmUQ2HuZABb0CpjQ2wLVHCuO5sPmAGis

https://www.nature.com/articles/ng.2737?fbclid=IwAR0sYqQUGvKw-cFDgr9HKgvq-A2H6mGS1P2s-o9jERvq18XqvAwq59we6og

First thing we need to mention is that alkalizing actually feeds candida and other unwanted microbes. Also things that cause Candida to go pathogenic can also cause SIBO. So if you have Candida you most likely have SIBO also.

https://mbio.asm.org/content/2/3/e00055-11?fbclid=IwAR0Q82Ed_d4ByWgsnT5cu_LBMZLg3t_lEocrCEAFSLysY0KS0kLza4dU0gg

https://www.theguthealthprotocol.com/wp/the-alkalizing-myth

https://www.thecandidadiet.com/ph-levels-candida/

https://bodyecology.com/articles/3-ways-candida-outwits-your-defenses

https://www.yeastinfection.org/crushing-candida-myths-candida-and-acidity/?fbclid=IwAR1SMIgeNKZMmXb_mev1viYVeYFUjMdBANjVx-EWAPXJAdDQv-uic7lHLlk

This is a very good article and is very accurate it dispels many candida myths.

https://www.candidaplan.com/10-candida-myths-2/

These are a very good articles on what triggers candida. When candida turns pathogenic it makes it difficult to absorb magnesium. Also symptoms of candida.

https://selfhacked.com/blog/treat-cure-candida/

http://brendawatson.com/gut-health/candidiasis/?fbclid=IwAR2GGGwQaKzkq3PX1nUN1Kr8R-oQNvF-UNXmTLmfKvpk9v3Eut8ynhPneX8

https://www.amymyersmd.com/2018/07/10-signs-candida-overgrowth/?fbclid=IwAR2LyZVdqwS-_DeXWAIPb-Qhp4DX2jb3pBIIzZiWviQp16NnUj-9gK60eq4

Those with inhibited vitamin D receptors and inhibited citric acid cycle can get kind of stuck in a state of ketosis which can increase the risk of candida turning pathogenic.

https://onlinelibrary.wiley.com/doi/full/10.1111/j.1574-6968.2000.tb09258.x?fbclid=IwAR0tEue1Y_B-XL8dk2rcXr6gOl9NOhra3gINLAzViXLcNSOU70r5wfwQ5ys

Antibiotics, eating GMOs and the high glyphosate levels found in our food is what is causing so many digestive problems now days. The should only be taken if absolutely necessary. Out of all of them glyphosate is one of the worst. So in order to heal one must do their best to avoid these things.

https://experiencelife.com/article/get-smart-about-antibiotics/

https://www.nature.com/articles/ismej20073

https://genomemedicine.biomedcentral.com/articles/10.1186/s13073-016-0294-z

http://www.discoverymedicine.com/Paul-D-Cotter/2012/03/15/the-impact-of-antibiotics-on-the-gut-microbiota-as-revealed-by-high-throughput-dna-sequencing/

https://detoxproject.org/glyphosate/glyphosate-and-roundup-negatively-affect-gut-bacteria/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3945755/

https://realfoodforager.com/glyphosate-an-assault-on-your-microbiome/

https://link.springer.com/article/10.1007/s00284-012-0277-2

Not only are antibiotics and glyphosate causing gut dysbiosis and candida overgrowth, they are causing other microbes to become very pathogenic.

https://mbio.asm.org/content/6/2/e00009-15

You have to balance your gut microbiota. To much of one or another can cause problems. Too many of one or another can make you very ill. Many will take the same strains of probiotics daily which will cause them to become out of balance. When this happens a person will become very ill.

http://www.probioticscenter.org/bloating-and-probioticsgov

Genetically modified foods can actually make our gut microbiome a pesticide factory.

https://anh-usa.org/genetically-engineered-food-alters-our-digestive-systems/

https://responsibletechnology.org/gmo-education/section5/

If we get the correct nutrients our gut bacteria will produce non toxic antibiotics for us.

https://www.jyi.org/2017-march/2017/5/1/addition-of-zinc-manganese-and-iron-to-growth-media-triggers-antibiotic-production-in-bacterial-isolates-from-the-lower-atmosphere

 

https://www.scientificamerican.com/article/fiber-famished-gut-microbes-linked-to-poor-health1/

If you feel like you are intoxicated you may need molybdenum because candida and other commensals that turn pathogenic can actually make you become intoxicated. Many feel bad after they eat fruit and believe it is because of the sugar. It is not they have too many bacteria producing these toxins. Vitamin B6 and B12 also help with this.

http://www.ei-resource.org/articles/candida-and-gut-dysbiosis-articles/the-candida-aldehyde-detox-pathway-and-the-molybdenum-connection/?fbclid=IwAR09kUu8Cpg_FkjVboJMoIckXp00FfJLg1cq01rvwzhs-r8azChqZD8UKPs

 

https://www.drlwilson.com/articles/ALDEHYDES.htm?fbclid=IwAR36kghu0UsendpV093rZzZh2d-IuA_-i3IzkVTF_7doNBmhIqrfbiUBHBM

https://academic.oup.com/alcalc/article/39/5/450/204019?fbclid=IwAR2Cyyz1VuYF1r00yB-kKhudXlRhKanJjd0I58pn0eA4U4kKMCjxXDiUoNE

Those who suffer from this may have lactic acidosis instead of alkalosis. I got to experience the pleasure of both because I over compensated from my lack of research and believing the many myths that are out there about candida. I see many who get on hamster wheels and cannot heal because they believe the myths about candida and sibo.

https://www.sciencedirect.com/science/article/pii/S2214426914000718?fbclid=IwAR3XxLuAknVLvWSwR8HTXL4EDjOvqlJFnhdygZ9Jkh8KiqZwPNM3dz52qFo

This is very good information about it but they incorrectly call folate folic acid. Folic acid is man made and very toxic to the body. Folate is natural and very difficult to OD on. It does not take much folic acid to have a negative impact on the body.

https://lauraslymerecovery.wordpress.com/2013/07/22/the-candida-and-acetaldehyde-connection/?fbclid=IwAR1965D_IpFOj4hVYpmccUIAXVVT2I403ykicY0juzUz4EsOj9EnKCluJ7g

 

We also have to prepare ourselves for candida die off.

https://candidaspecialists.com/candida-die-off-symptoms/?fbclid=IwAR3dHtqa1noL3FwAR623CKJV5_y2eKh323wHkjno6O22vLsOBGrUpzdHyYk

 

Our gut bacteria protect each other and secrete and enzyme that protects them from Reactive Oxygen Species. When the above mentioned causes a loss of those bacteria then the other gut bacteria is defenseless and also dies.

http://europepmc.org/articles/PMC4567566

Pau D Arco is good for candida. Also a list of foods that help fight candida.

https://draxe.com/pau-darco-tea/

https://www.thecandidadiet.com/candida-fighting-foods/

https://www.organiclifestylemagazine.com/kill-candida-and-balance-the-gut-quickly?fbclid=IwAR0D3TMLc-lFwmevWOHZwT5ZVwWdPiFvIlEJ7eDZ24rmNdndog82F0dZUtI

Burdock root also helps with candida.

https://www.yeastinfectionadvisor.com/burdockroot.html

 

Biotin helps with candida.

 

http://ericbakker.com/biotin-for-candida/?fbclid=IwAR3WwRIGig2RKm-NPzO8xsDfCr6z4v4YW17LHWaLEMpMibztVoaKY6jg3Bw

Candida and SIBO are often mistaken for each other.

https://www.holistichelp.net/blog/candida-sibo-or-h-pylori/

http://www.ei-resource.org/illness-information/environmental-illnesses/candida-and-gut-dysbiosis/

https://www.holistichelp.net/blog/candida-sibo-or-h-pylori/

Candida and SIBO can increase ammonia levels in the body. Also metabolic issues can cause high ammonia levels which will cause Candida to go from commensal to pathogenic. If this happens H Pylori will go from commensal to pathogenic. You cannot get them to go back to commensal unless you get your ammonia levels down. The PH of the digestive system is supposed to be acidic. High ammonia levels will cause it to become alkaline making it even more difficult to balance our gut microbiome. When our digestive system becomes alkaline it causes our good gut microbes to become reduces and it makes us more prone to bad. Also our sulfur digesting and methane producing become more numerous will start causing problems with our BH4 and CBS pathways. To break the cycle we must support the metabolic pathways effected and reduce our consumption of meat and high sulfur foods for about three months. Once candida turns pathogenic it will actually contribute to the digestive system and even the bladder becoming alkaline which will make it and other bad microbes increase more rapidly.

https://www.dovepress.com/hepatic-encephalopathy-current-challenges-and-future-prospects-peer-reviewed-fulltext-article-HMER

https://drjockers.com/cbs-mutation-low-sulfur-diet/

https://www.mygenefood.com/can-handle-high-protein-diet-answer-may-genetic/

People believe alkalizing will reduce candida but it will increase it.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3101780/#

This is a good article on breaking down biofilms which many unwanted microbes form to protect themselves.

http://www.gestaltreality.com/2013/09/16/how-to-eliminate-candida-biofilms/

High ammonia levels damage the brain. It does it in two ways. It damages nerves cells and increases glutamate. Those with high ammonia levels will be sensitive to glutamate and will develop very bad headaches if they consume it.

http://www.neuroradiologycases.com/2012/02/hyperammonemic-encephalopathy-mri.html

https://www.ncbi.nlm.nih.gov/pubmed/2415874

https://www.ncbi.nlm.nih.gov/pubmed/17006913

https://www.ucl.ac.uk/~ucbcdab/urea/amtox.htm

Zinc, P5P and molybdenum about three times a week can reduce ammonia levels.

https://www.ncbi.nlm.nih.gov/pubmed/1505922

https://www.ncbi.nlm.nih.gov/pubmed/27582881

Saccharomyces Cereviciae also known as brewers yeast help reduce candida and other bad gut microbes. It cannot live in the body long though so has to be taken until the bad microbes are no longer a problem. It is also known as bakers yeast. People falsely believe yeast and candida are realated. Candida is a fungus brewers yeast or bakers yeast is a bacteria. I do not know why they are calling candida a yeast infection because it is a fungus infection.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6037478/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5354225/

https://www.nature.com/articles/srep36239

https://www.sciencedaily.com/releases/2017/01/170117163045.htm?fbclid=IwAR31HTMAs0BctwzBflPN3hiE2azPmQ-Y8rKqnGJQvZKpV248mJNoz1f8IgI#.WMn64tfaVUk.facebook

Lactobacillus species of bacteria also prevents candida and sibo. If a person is deficient in Lactobacillus they will have difficulty gaining weight.

https://www.healthline.com/nutrition/lactobacillus-acidophilus#section3

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2705118/

Bifidobacterium increased the acid levels of our digestive tract which inhibits bad bacteria from growing and help keep our digestive tract acidic. It has been shown to reduce symptoms of irritable bowel disease.

https://www.nature.com/articles/ajg200925

 

Bifidobacterium Infantis protects us from autoimmune disorders by regulating our T cells. B infantis also helps protect our digestive tract.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4277968/

 

https://www.ncbi.nlm.nih.gov/pubmed/28230606

Bicarbonate rich mineral water can help reduce ammonia levels. I did not have access to this so I used a tablespoon of sodium bicarbonate in a cup of water about three times a week sometimes more depending on how my ammonia levels were. It worked great for reducing ammonia levels.

https://www.hindawi.com/journals/ecam/2015/824395/

Calcium D gluturate helps reduce ammonia, endotoxins and mold toxins. It should only be taken about three times a week because overstimulating glucuronidation can deplete very important enzymes and then we can no longer detox these substances.

https://blog.bulletproof.com/calcium-d-glucarate/

Coconut oil helps with candida.

https://draxe.com/caprylic-acid/

Uva ursi and barberry contain berberine which helps fight many types of infection.

https://www.sigmaaldrich.com/life-science/nutrition-research/learning-center/plant-profiler/arctostaphylos-uva-ursi.html?cm_mmc=SocialSharing-_-Facebook-_-Links-_-/content/sigma-aldrich/global-home/global/en/life-science/nutrition-research/learning-center/plant-profiler/arctostaphylos-uva-ursi

many herbs can help with candida.

http://www.candida-cure-recipes.com/antifungal-herbs.html

https://www.mdpi.com/1422-0067/18/6/1283

This is a good list of herbs but I do not agree with consuming tea tree oil. It can be toxic when consumed.

https://www.consciouslifestylemag.com/natural-antifungal-supplements-candida/

Yarrow along with it’s pain killing and ability to make a person feel more positive has many antimicrobial and antiparasitic properties.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3232110/

 

https://www.researchgate.net/publication/317632510_Pharmacognosy_Phytochemistry_and_Pharmacological_Properties_of_Achillea_millefolium_L_A_Review

 

http://www.ema.europa.eu/docs/en_GB/document_library/Herbal_-_HMPC_assessment_report/2011/09/WC500115468.pdf

Beta Glucan can be found in mushrooms and organic oatmeal. It helps fight candida and many other pathogens.
Beta glucans modulate the immune system helping to normalize it. Many pathogens will cause an over active immune response which helps to stealth them from the immune system. This helps to enhance the immune response to a pathogen. I have posted on beta glucan if you want to learn more.

http://www.mdpi.com/1422-0067/18/9/1906/htm

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4322159/

https://owndoc.com/candida-albicans/mushrooms-fungi-molds-candida/

https://www.omicsonline.org/open-access/bakers-yeast-betaglucan-decreases-episodes-of-common-childhood-illness-in-1-to-4-year-old-children-during-cold-season-in-china-2155-9600-1000519.php?aid=74171

https://www.ncbi.nlm.nih.gov/pubmed/29199568

https://www.yeastinfection.org/is-reishi-mushroom-good-for-candida/

Apple cider vinegar is good for fighting candida and many other infections but it is high histamine so those with allergies and mast cell degranulation will have problems with it and other high histamine food that help like yogurt.

https://www.nature.com/articles/s41598-017-18618-x

Those suffering from this will develop higher ammonia levels when they eat meat. Branched chain amino acids may be a good alternative for a source of protein. You must make sure they do not contain phenylalanine. Phenylalanine increases ammonia levels in the body when we have CBS or BH4 issues. Meat and potatoes are high in phenylalanine.

https://www.bodybuilding.com/content/bcaas-the-many-benefits-of-amino-acids.html

Nutrients needed when fighting candida.

http://www.orthomolecular.org/library/jom/1985/pdf/1985-v14n01-p050.pdf

http://www.ei-resource.org/articles/candida-and-gut-dysbiosis-articles/the-candida-aldehyde-detox-pathway-and-the-molybdenum-connection/

Candida can cause sugar cravings.

http://www.arltma.com/Newsletters/SugarCarbNews.htm

Omega 3 is needed but Omega 6 must be avoided to prevent endotoxemia.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4650612/

 

I had difficulty eating fruit. Probiotic yeast helped correct that.

https://www.healio.com/gastroenterology/irritable-bowel-syndrome/news/online/%7Bbb454dd3-01bf-4720-a01e-912c62d09062%7D/probiotic-yeast-improves-abdominal-pain-bloating-in-ibs-c-patients
This is why it is very important to get polyphenols, oligosaccharides and polysaccharides in our diets. It feeds our beneficial bacteria which promotes better health. There are myths about the sugars in foods like fruits and vegetables feeding candida when it becomes pathogenic but the opposite is true. Much of the false information out there drives me to believe that the pharmaceutical companies put it out there to keep people on a hamster wheel of poor health so they will have a steady customer. If we lack certain microbiota we may have to introduce foods slowly and increase our intake as the microbes start increasing. It can take months for some to get back to normal levels.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5493053/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6000740/

https://www.cell.com/trends/microbiology/fulltext/S0966-842X(16)30143-3

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4961256/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5429330/

Not only do we need to feed the good gut bacteria but our diets to manipulate our gut bacteria needs to be unique to each of us. A diverse diet gives us a diverse microbiome which protects our health.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5801817/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4918027/

The myth I see that is the most damaging is people being told to avoid all fats. They are a necessary nutrient for good health.

https://www.ncbi.nlm.nih.gov/pubmed/28482838

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4650612/

Another myth is to avoid carbohydrates. It is a good way to develop autoimmune disease. We need a variety in our diet.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5857604/

 

These are the probiotics that help me with my dairy issues.

http://www.sciencedirect.com/science/article/pii/S0023643812000503

http://www.sciencedirect.com/science/article/pii/S0963996912000890

http://pubs.acs.org/doi/abs/10.1021/acs.jafc.6b00714?journalCode=jahttp

 

If your microbiome imbalance persist it may be from your sexual partner.

https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-016-0161-6

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3225992/

https://academic.oup.com/aje/article/156/12/1133/151795

 

We need H Pylori to prevent allergies and asthma so we do not want to kill it we want to get it back to commensal by reducing our ammonia levels.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3888205/

https://m.jci.org/articles/view/45041

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5548235/

http://www.townsendletter.com/June2013/helico0613.html#.WM1yDBl_6Pw.facebook

https://www.ncbi.nlm.nih.gov/pubmed/28193167?fbclid=IwAR3UMOdxhpuLV0zKKMlMWr4HK1_fgLhTUv8aTAuXc62KDoeQnuxPGyh3qEE

Is it time to give up on the flawed modern day science of genetics?

Written By Lee Stevenson, edited by Tracey Northern

After writing this it made me realize that the pharmaceutical industry and biotech industry are using the lies about genetics to put a smoke screen up and convince the victims their genes are at fault for their illness when they are the ones actually causing all the chronic illness that has reached epidemic levels. Only 3% of chronic illness can be attributed to genetics. So why do people ignore what could be causing the other 97% which is our exposome.

Time to throw the modern day theory of how genes work out of the window along with GMOs and vaccinations which are based on it. As you learn about genes you come to realize plant and animal genes work as a network and a disruption or change in one gene affects the whole network and can have unintended results. We learned this from genetically modified crops. They are less nutritious and affect the body in the same way as food poisoning. It is why the GMO industry is destined to fail. They have lower yields and pests easily circumvent the qualities they have added to the plants to prevent pests so farmers end up with a crop that produces lower yields and is still attacked by pests. Take as an example the case that happened in India where farmers left their animals to graze on the cotton plants after they harvested the cotton, which was common practice, but with the genetically modified cotton crops the animals died.

They have shown that adding genes has unintended consequences. Genes are much more complex than originally thought and the theories that science clings to are being proven wrong daily. There are so many things that can affect how a gene functions and heritability only contributes a very small fraction of how our genes function. Humans share a lot in common with plants so I believe it would be safe to assume this is true also for plants.

When you see the many variables that affect genes you lose confidence in genetic testing in order to predict what illness a person may be prone to. I have seen those with supposed gene flaws who had no gene related disease and others who do not have those gene flaws and yet have disease specific to those very same genes.

This indicates we are missing something. It also shows how flawed science is. Some research papers that use anecdotal evidence have to be retracted while others, usually funded by corporate science, are plagued with nothing but anecdotal evidence and get accepted as fact and even promoted as proven science. Corporate Science has dumbed down true science, does not tolerate real science and will destroy the careers of those who mention real science or point out the fallacies of corporate science.

What we have learned from the bio-tech’s fake science is that it is more important to support cell signaling and the metabolic pathways than provide the proper nutrients needed to either stimulate or inhibit certain gene functions in a way that take other genes in the network into consideration. Something the biotech industry cannot and does not do.

Now we come to the fake science of the vaccine industry. Vaccines have been found to permanently alter genes and those changes get passed on to the next generation. We can see the effects on society. Children are being born with chronic illness that they must deal with all their life. Most of these things they will falsely claim are caused by our genes. The pharmaceutical industries studies are also plagued with anecdotal evidence and outright fake science that has been proven wrong. For example vaccination is based on germ theory but germ theory has repeatedly been proven wrong. Yes means yes and no means no except when it comes to corporate science. Yes and no mean what they determine them to mean. Now here is where I think the omnigenic model will go wrong. They will not consider the fact that humans/animals and plants have microbes that modulate their genes. Changes in the functions of those genes also change animal and plant microbial makeup. Microbiota can alter host gene expression. These things have definitely not been considered by the biotech industry or the pharmaceutical industry. Vaccinations have been shown to alter the bodies T and B cell balance. This has been shown to alter our microbiome which would alter the function of many genes that are modulated by our microbiome. Something as simple as altering our diet can change our microbiome and alter gene expression in the body. I firmly believe the omnigenic model is much more accurate then the polygenic model.

As you research more and more you can only come to one conclusion. Our external environment is just as important as our internal one for maintaining healthy genes. When all the facts and information are considered a person can only conclude that our internal and external environment and the external (enviromental) biome and our internal biome have more to do with gene expression then anything that is inherited. This is also true for plants.

When you look at the data and real science it starts becoming clear blaming genes is a smoke screen for the harm being done by the pharmaceutical industry, medical industry and biotech industry. It is a way of blaming the victims for the harm they are doing. Medical error is the number one cause of death in the world. Now add to that adverse reactions to drugs and vaccines kill many. Adverse reactions to pharmaceutical products rarely get reported. Keep in mind that the biotech industry is owned by pharmaceutical companies. There is more money in keeping people ill. A healthy patient is a lost customer. So when you consider all of these things it becomes clear modern medicine and the pharmaceutical industry are the number one causes of death and chronic illness in the world and they use the flawed genetics science to blame the victims for the harm they are doing.

https://www.cell.com/cell/fulltext/S0092-8674(17)30629-3

https://www.biorxiv.org/content/early/2018/09/24/425108

https://www.genengnews.com/topics/omics/omnigenics-says-all-genes-involved-in-complex-traits/

How our enviroment and our microbiome affect our genes;

https://www.researchgate.net/publication/265791951_Environmental_Changes_Microbiota_and_Allergic_Diseases

https://phys.org/news/2018-07-genetic-gut-bacteria-host-metabolism.html

https://www.worldhealth.net/news/gut-microbes-alter-gene-expression-diet-dependent-/

https://www.pnas.org/content/114/36/9671

https://www.ncbi.nlm.nih.gov/pubmed/24286462

Because plants are very similar to humans they also are effected the same way;

https://www.the-scientist.com/features/how-manipulating-the-plant-microbiome-could-improve-agriculture-30124

https://www.nature.com/articles/ncomms12151

https://aglifesciences.tamu.edu/rootbiome/wp-content/uploads/sites/38/2015/06/2014-Rout-plant-microbiome.pdf

If our environment affects our genes more then anything, what are GMOs doing to those who are eating them?;

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6279436/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6066743/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5131776/

As can be expected this also occurs in plants;

https://www.sciencedirect.com/science/article/pii/S1369526616302151

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4142964/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6207588/

GMOs change the microbe diversity of the soil. Since we know, just like humans, plants rely on microbes to break down food for absorption, this disruption of diversity would also inhibit nutrient absorption and probably explains why GMO crops contain less nutrients than their non GMO counterparts;

https://www.researchgate.net/publication/7333967_The_impact_of_genetically_modified_crops_on_soil_microbial_communities

https://aem.asm.org/content/77/21/7611

https://www.eurekalert.org/pub_releases/2012-04/ajob-gmc041712.php

http://www.environment.gov.au/protection/biotechnology/research-projects-and-resources/ecological-impacts-gm-cotton-on-soil-biodiversity

If a plant is genetically altered to produce more of a certain nutrient it will produce less of other nutrients;

https://discoveryeye.org/gmo-and-nutritional-content-of-food/

http://www.massmed.org/Patient-Care/Health-Topics/Nutrition-and-Physical-Activity/Genetically-Modified-Foods-(pdf)/

http://naturalsociety.com/scientist-organic-crops-better-nutrition-gmo-crops/

Often the genetic modification in plants causes changes in their nutritional value and the chemicals used on GMOs have been found to chelate many nutrients from the soil. Altering the genes of plants alters human genes too;

http://farmandranchfreedom.org/wp-content/uploads/2014/01/glyphosate-accumulates-roundup-ready-gmo-soybeans.pdf

http://farmandranchfreedom.org/wp-content/uploads/2013/06/carman-vlieger-2013-gm-toxicology-study-pigs.pdf

https://www.momsacrossamerica.com/stunning_corn_comparison_gmo_versus_non_gmo

https://www.rareseeds.com/corn-study/

/

Microbiome of Centenarions.

old-people-2893651_640

I was looking at the microbiome from centenarians that live around the world. One commonality they had is a very diverse microbiome. Centenarians had most of the microbiome we have but they had many others not found in most now days. They could eat things many could not now days because we lack the microbiome to digest them. They had higher levels of bifidobacterium. They had higher levels of Akkermansia, Faecalibacterium Prausnitzii, they also had a variety of microbiota from the clostridium cluster XIVa which is the commensal that protect us from infection and most are butyrate producing. These are strains I believe contributed to their longevity because I found they were common in almost all the centenarians but are not found in most others. Centenarians also had high levels of acetate producing bacteria like Bifidobacterium Longhum and Bifidobacterium Infantis.

Centenarians contain Coprococcus species like C Catus, C. Eutactus, C. Comes which produce short chain fatty acids and acetate. They break down glucose , fructose and other saccharides.

Anaerotruncus Colihomnis – spore forming, indole producing. It breaks down many types of sugars including glucose, manose and fructose.

Blautia Obeum – protects from vibrio cholerea.

Angerostipes Rhamnosivorans – butyrate producing. Can digest a variety of fibers and break down lactose.

Coprococcus Eutactus – butyrate producing, produces many types of short chain fatty acids.

Marvinbryantia Formatexigens – consumes oligosaccharides increases succinate. Can break down chitosan, xanthum, guar gum, and pectin.

Roseburia Inulinivorans – breaks down long chain inulin like chitosan, xanthum, guar gum, and pectin. It also produces butyrate.

Cristensenell Minuta – prevents obesity.

Christensenella Timonensis – prevents obesity.

Centenarians have low levels of bacterioidetes and Streptococcus species of microbiota. They had normal levels of bacteroides which is usually elevated in those with inflammatory bowel disease. They also did not have Fusobacterium which is high in those with inflammatory bowel diseases. They did not have the pathogenic clostridium species which is probably because of the high levels and variety of Clostridium XIVa species they have which protects from the pathogenic Clostridium. They also had lowe levels of prevotella.

Two things I also found they had in common but not related to gut microbiome they strongly supported family and were not as prone to getting angry and being hateful and they rarely took pharmaceuticals or needed allopathic medicine. Most chronic illness can be linked to pharmaceuticals and allopathic medical errors. Centenarins had higher bile acid production then those who did not live as long.

True cause of illness and things that may help.

This is not medical advice I am posting this for educational and informational purposes.

 

 

I have a lot more to add to this but need a break and then I will finish it. I am going to add the things that negatively impact health and how it happens. Some of it I have covered but I have not covered the how part of it I only covered things that may help correct it.

Because probiotics can cause sepsis if you have ulcers or your gut is too porous I consumed a lot of mucilage and took bismuth in order to make sure my gut healed enough that would not happen.

To fully grasp the information here and to grasp the information in the links you will need to understand that Germ Theory and Terrain Theory have been proven wrong and that is why our Facebook group Synergistic Health decided we need a new theory “Enviroment and Biome Theory of Health”

https://iamajuicer.wordpress.com/2018/08/18/germ-theory-and-terrain-theory-are-wrong/

 

This article discusses how our microbiome effect the whole body even the blood brain barrier.

In this post I am going to try and show how our environment, biome of our environment and our won biome effect our health. This shows that our Facebook group Synergistic Health is correct with our theory “Environment and Biome Theory of Health” is correct and that germ theory and terrain theory are incorrect. Learning this will help people understand why their genes have very little impact on their health compared to the above mentioned things. I also list the things that may be able to correct them.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5102499/

In all the research I have read gut diversity increases health and longevity and is found to be a commonality in centurions.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6051225/

There is a myth we should alkaize our digestive system must be acidic and alkalinity cause pathogenic and hydrogen sulfide producing bacteria to increase. This causes sulfation issues and increased ammonia getting the body stuck in a cycle. Bile and digestive enzymes become inhibited which cause high estrogen levels and copper will become biounavailable. You must break this cycle by getting ammonia levels down. BH4 levels get low when this happens eating protein increases ammonia levels. Short chain fatty acids balance our T cells so it is important to increase SCFA producing bacteria. I did a blog post on reducing ammonia levels (alkalosis). I did a post on reducing akalosis. I also did a summary of my notes which covers many of these things. If you search for akalosis and summary you should be able to find the information.

Fiber especially inulin increases the good gut bacteria. Exercise also increases our good gut bacteria. Reducing stress or learning to deal with stress increases our good gut bacteria. Ghee is high in butyrate which increases our good gut bacteria.

Egg and milk allergies indicate high Staphylococcus Aureus levels. This is caused by low microbiota that breaks up biofilms and produces natural antibiotics. This can also be caused by low lactobacillus paracasei, lactobacillus adolenscentis and lactobacillus rhamnosis levels.

I do not mention the strains that produce histamines because they are usually not a problem unless something is wrong in the body and they are needed for gut and body health. Avoiding the foods that cause them to produce histamines is more effective. Fermented foods, and aged meats and many cheeses will cause them to produce histamines. Some cheeses like Gouda and Parmesion have species of microbes that reduce histamines. This is why overconsumption of them can cause constipation because histamine stimulates stomache acid production. Those with low stomach acid production may benefit from eating foods that increase histamines.

An imbalance in our gut bacteria can lead to the production of high substance P levels which leads to systematic inflammation. If levels get high enough a person will start to lose their hair, they will get burning in their skin especially at night. The burning mostly occurs in the scalp and down the spine. I posted on how to reduce substance P.

When replacing a microbe you may be lacking it is normal to experience cramps and bloating until they get established. Taking the same probiotic daily can cause gut dysbiosis which is as bad as when candida goes pathogenic and can cause candida and H Pylori to switch from commensal to pathogenic. Probiotics should be alternated and one should take a break from them to let the microbial community balance out.

Most Bifidobacterium and Lactobacillus have some oxalate degrading abilities. The microbiota that produce vitamin B12 need chromium to be present to produce it.

Exercise increases our good gut bacteria. Stress and trauma increase our bad bacteria so it is very important to learn to meditate , pray and not to dwell on things you can do nothing about and do your best to get over trauma and do not hold grudges or be resentful or hateful. When we have a lot of negative emotions it increases the gut bacteria that increases adrenaline and it can tax our adrenals.

Diets rich on complex carbohydrates have been shown to prevent infection from food born pathogens. Processed sugar has been found to dramatically increase risk of infection from ford born pathogens.

Often times a persons microbiome is influenced by their sexual partners. Their sexual partner may have different metabolic factors so could appear to be unaffected. Usually a person sexual partner should be treated for dysbiosis or infection also to prevent constant reinfection or constant microbiome disruption.

Galacto-oligosaccharides increase absorption of nutrients, and increase the beneficial bacteria that are important in health mental health and cognition. It prevents constipation and helps protect from food born pathogens. It increases the microbiome that reduces anxiety and pain. It is derived from raw milk and is destroyed during pasteurizing. It also decreases the risk of pulmonary infections. It reduces almost all inflammatory markers in the body. It reduces intestinal inflammation. Galacto-oligosaccharid and fructo-oligosaccharid helps to prevent diabetes.

Our bodies secrete FUT2 to modulate our immune system and to keep our good microbiome health. Many things can make us deficient in FUT2 enzymes which causes a loss of our good gut microbiome and can lead to inflammatory bowel diseases and gut dysbiosis. Fructooligosaccharide and oligosaccharides can replace FUT2 until it is corrected. This is can also result from a deficiency in the microbiota that stimulate IL-22

A loss of our gut microbiome can cause raised zonulin levels which results in many food intolerances, metabolic issues , increase susceptibility to infection and if not corrected can lead to acidosis or alkalosis. Zonulin regulates gut permeability if levels get too low we can develop malabsorption issues. If zonulin levels get to high we can develop many health problems. It can also lead to interstitial cystitis and damage the blood brain barrier which results in the loss of protection of the brain and can lead to infection , encephalopathy and even chira which is a life threatening condition. Increased zonulin levels causes depression, anxiety and can even cause paranoid delusions and psychosis. Mold toxins can increase zonulin levels. BT Toxin found in GMO increase zonulin levels. Farm chemicals which are found to be heavy in our food increases zonulin levels especially glyphosate and glufosinate. It is very important to eat organic when possible. A diet high in fiber and resistant starches increases the microbes that reduce zonulin. Oddly our sterile lifestyles have caused a loss of the microbes that keep zonulin levels balanced. They have found those who are in nature and work with the soil a lot get the good microbes that keep zonulin levels balanced. Unfortunately glyphosate and glufosinate are killing those microbes in the soil which is making it more and more difficult for a person to get those microbes. Endotoxins and mycotoxins increase zonulin levels making us more prone to leaky gut. Leaky gut causes systematic inflammation which can lead to autoimmunity. Butyrate producing gut bacteria reduce zonulin levels helping to prevent leaky gut. Butter and raw milk is high in butyrate. Inflammation causes increased zonulin levels so microbes that reduce inflammation will decrease zonulin. When zonulin levels are how toxins the body would not absorb but would get excreted are easily absorbed which causes high heavy metal and other toxins levels in the body. High zonulin levels also result in food particles entering the blood stream which causes a lot of food sensitivities. This can be corrected by addressing the leaky gut. When zonulin levels are high it increases mast cell degranulation which can lead to mast cell activation syndrome or mastocytosis. This increases histamines leading to autoimmunity and allergies. This also will correct itself once zonulin levels are reduce. Those with high zonulin levels should avoid gluten and gliaden until it is corrected because they raise zonulin levels. High zonulin and high inflammation levels has been linked to just about all types of chronic illness. Inflammation can cause high zonulin levels, high zonulin levels can lead to inflammation creating a cycle that is difficult to break. Inflammation disables the immune system and is why so many illnesses like tick born illness, candida and many other infections are becoming epidemic. Almost all illness can be link to zonulin.

https://www.sciencedirect.com/science/article/pii/S2352551717300288

https://www.physiology.org/doi/full/10.1152/physrev.00003.2008

https://www.frontiersin.org/articles/10.3389/fmicb.2017.01936/full

https://www.tandfonline.com/doi/pdf/10.1080/21688370.2016.1251384

Our gut microbiome regulate our zonulin levels which regulates the tight junction layer. When zonulin is high then we develop leaky gut which causes chronic illness and even effects our brains. Our gut bacteria even regulate our HPA axis. Microbes that increase IL-10, T regulatory cells and reduce inflammation will reduce zonulin levels which will restore the tight junction protein layer. Also stress increases zonulin so microbes that reduce stress will also decrease zonulin levels.

https://www.tandfonline.com/doi/pdf/10.1080/21688370.2016.1251384

https://link.springer.com/article/10.1007/s00394-018-1784-0

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5288588/

Our sterile lives have added to the increase in zonulin levels. Also nutrient deficiencies cause by over farming land and chemicals like glyphosate and glufosinate that chelate nutrients are causing nutrient deficiencies which increases zonulin. This indicates the the biome of our environment is also important for our health. It also indicates that our environment itself can influence our health.

http://www.pnas.org/content/106/39/16799.long

Nutrient deficiencies also stimulate zonulin and so do bad fats and excessive meat consumption. Excess vitamin B12 increases zonulin levels. I do not supplement with it, I nurture my gut microbiota that produce it and I make sure I get cobalt which they need to produce B12. On the other end of the scale zonulin deficiency can result in the inability to absorb nutrients. This shows the importance of learning to achieve homeostasis. I cannot find studies showing that inhibited zonulin causes malabsorption but I have noticed those who have high levels of the bacteria that inhibit zonulin and low levels of the ones that stimulate zonulin have malabsorption issues.

https://www.sciencedirect.com/science/article/pii/S0041134514008045

High zonulin levels can lead to decreased intestinal motility which causes the food to sit in the digestive tract and ferment instead of digesting. This increases the ammonia, hydrogen, sulfide and methane producing microbes which raises zonulin levels even higher. If I ever get a chance to write a book I will cover it in more detail. Once this cycle starts it is very hard to break and a person will not be able to absorb nutrients because their food is not getting broken down properly.

https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0111132#s4

So all this being said the bigger the variety of gut microbes we have the more balanced our zonulin becomes.

Butyrate producing microbiota increase TGF-B which is needed to prevent some commensals from becoming harmful. A deficiency in TGF-B can lead to inflammatory bowel disease which can cause bile to be inhibited. The most important of these are F Prausnitzii, Clostridium Leptum, Eubacterium Rectale and Roseburia. If deficient in IL-10 or TGF-B the microbiota that stimulates bile will become pathogenic in nature IL-10 and TGF-B work together to keep them in check so they continue to function properly. I discuss bile in more detail at the end of this article.

https://link.springer.com/article/10.1007/s00535-017-1350-1

https://www.tandfonline.com/doi/full/10.3109/0284186X.2015.1054949

Raw potatoes, inulin, chickpeas and other legumes feed the gut bacteria that prevent gliaden and gluten intolerance. Too much of these can increase the glucose levels in the blood. That may be good for those with malabsorption but high glucose levels can lead to cancer and other health problems.

Increased CB1 receptor activation causes leaky gut which can lead to food intolerances from our gut becoming too porous. This can lead to increased LPS levels which can lead to endotoxemia and sepsis. Increased zonulin also does this. Stress increases zonulin.

The PH of the gut and bladder should be between 4 to 5. The lower the number the more acidic the high the number the more alkaline. We do not want alkaline it causes infection and gut dysbiosis. Candida and H Pylori will go from commensal to pathogenic.

Bloating can be from taking too much of a certain probiotic which can lead to dysbiosis , inflammation, ulcerations, or high histamines. High histamines will cause acid reflux. Low histamine inhibits bile and will cause bile reflux constipation and low stomach acid production. If you have low histamines fermented foods will increase the histamine producing bacteria but be cautious do not increase them too far. We can also become bloated if candid or H Pylori go from commensal to pathogenic.

Increased gut permeability (leaky gut) can lead to bone loss, autoimmunity, and many metabolic issues.

Our gut bacteria need carbohydrates but many avoid them. There are good carbs and bad carbs.

A microbiotia accessable carbohydrate diet increases beneficial bacteria that produce short chain fatty acid. This consist of fiber and carbohydrates. This increases the bacteria that produce short chain fatty acids. If we do not produce enough SCFA we will become constipated and bile production will become inhibited. This will also happen if we develop malabsorption from having high bacteroidetes, methane producing and sulfur digesting bacteria. They contribute to malabsorption, constipation and inhibited bile production from a lack of SCFA in the body. Our blood glucose levels will also become very low and we may develop high insulin levels. Clostridium infection is also a major cause of this and indicates we are lacking the microbiota that protect us from it. This can cause a cycle that is hard to break because bile is needed to prevent clostridium infection.

High histamines usually indicates low bifidobacterium levels. Bifidobacterium degrade histamines. Low Bifidobacterium can cause weight gain in some people and can lead to anxiety, difficulty sleeping and difficulty concentrating. Our histamine degrading bacteria need vitamins A,C, E and Zinc. Bifidobacterium which there are many species produce folate. Most Bifidobacterium increases IgA which prevents food intolerances and allergies. Bifidobacterium also break down gliaden. Excess gliaden can raise zonulin levels leading to the tight junction layer becoming more permeable resulting in leaky gut.

Lactobacillus needs vitamin A and consuming it has been shown to restore lactobacillus. Most lactobacillus prevent candida and fungus infections. Most Lactobacillus prevent lung infection. Most Lactobacillus increase IL-10. IL-10 is needed for commensalism. Those deficient in Lactobacillus will be extremely underweight.

Click to access c191fc3c8efbd745d5583d6be940a4dcae06.pdf

Most probiotics should be taken with an oligosaccharide. They help feed them and get them established. Pectin also protects the good bacteria helping it to thrive. Olive oil has been found to prevent them from making TMAO. If TMAO levels get too high we can develop a fish like smell, diabetes and/or cardiovascular disease.

Lactobacillus Reuteri increases oxytocin which helps keep us calm and helps prevent depression. It also helps prevent diarrhea. It increases intestinal absorption of nutrients. It prevents cavities and promotes dental health. It protects against pathogens and parasites. It has been shown to help with autism. L Reuteri produces food need by most of the other commensal bacteria. It requires sugar to produce the food the commensal microbes need. L reuteri also help prevent asthma. Helps restore normal vaginal and bladder microbiome. If you are sensitive to sugars and starches it could be an indication you are deficient in L Reuteri. L Reuteri breaks down sugars and starches. A deficiency in Lactobacillus Reuteri can also contribute to milk allergy and a lower resistance to pain. It prevents gingivitis and periodontal disease. It helps keep H Pylori commensal. L Reuteri improves the production of bile.

Clostrium Leptum has been found to be low in those with inflammatory bowel disease and Chohn’s disease. It breaks down carbohydrates and produces butyrate. It reduces inflammation.

I believe L Reuteri and L Fermentum are the same species. Often times research papers state that they are the same species.

Lactobacillus Fermentum found in raw goats milk protects from urinary tract infection and food born pathogens. It has been shown to increase other lactobacillus bacteria. This would help those who have difficulty gaining weight. It is resistant to most antibiotics and has been found to transfer that ability to the other but microbes. This also would help with lactos intolerance. L Fermentum prevents skin rashes and eczema By increasing TH1. It prevents IgA related allergic disease. L fermentum helps prevent urinary infection. Low I IgA levels are common in inflammatory bowel disease and those who have malabsorption disorders. Reduces endotoxins. Helps protect from cavities and gingivitis.

Bacteroides Vulgatus increases bile production, if levels are low a person is susceptible to inflammatory bowel disease. If levels get too high a person will develop celiac disease. This occurs if a person is lacking the microbiotia that stimulate IL-10, SMAD3 and TGFB.

Pediococcus pentosaceus prevents clostridium infection of the digestive system by reducing zonulin. This would improve bile production. It also reduces inflammation. It produces natural antibiotics that fight bacteria.

Bacillus Coagulins prevents lactose intolerance. Helps break down food better increasing nutrient absorption. Helps prevent diarrhea. Prevents gas, bloating and intestinal inflammation. Helps prevent constipation. Reduces endotoxins. Improves bladder and vaginal health. Helps keep H Pylori commensal.

Bacillus Subtilis produces food needed by the other commensal microbes has been shown to balance the gut microbiome. It prevents gastrointestinal and urinary tract infection. It is found in soil. It stimulates IgM, and IgG which important part of immune function. Protects the DNA and has antioxidant properties. Helps prevent diabetes and cardiovascular disease. If it is supplied with lactulose which is found in raw milk but destroyed during pasteurization it will prevent constipation. It reduces inflammation and has been shown to reverse irritable bowel disease. It Balances our T cells which would prevent allergies and autoimmunity. It prevents H Pylori and Candida from becoming pathogenic. Reduces endotoxins and heals the liver and kidneys. It prevents skin rashes and lesions. It increases our ability to tolerate heat. Helps break down phytic acid preventing it from being and antinutrient. B Subtilis has been shown to reduce blood pressure and prevent atherosclerosis. B Subtilis communicates with the body to let is know what is going on. It kind of acts like a soldier and a nurse. It stimulates IFN-y in spleens of mammals which is an important part of the bodies ability to fight infections. Seems more important for fighting infection then dendric cells and natural killer cells. IFN-y prevent viruses from being able to adhere to cells. Increasing IFN-y increases CD8 molecules. Those who are TH1 dominant should avoid this strain it increases TH1.

https://iai.asm.org/content/75/3/1167

Lactobacillus sanfranciscensis helps degrade phytate preventing them from being and antinutrient. Decreases gut permeability and prevents obesity. Reduces symptoms of inflammatory bowel disease. It is found in raw sour bread dough.

Lactobacillus pentosus found in fermented olive products. It helps prevent food born pathogens. It helps break down carbohydrates. Helps reduce symptoms of lactose intolerance. It can break down a wide variety of sugars and carbohydrates.

Lactobacillus Salivarius reduces histamines. Protects the throat, mouth and nasal cavities from infection. It helps prevent cavities. They help keep the ph of the intestines balanced. It helps with nutrient absorption especially folate. It reduces nausea, bloating, cramping and inflammation in the digestive system. It protects us from food born pathogens. It protects us from getting strept throat and halitosis. It lowers cortisol levels and reduces stress and anxiety. L Slivarius increases endurance. Helps prevent lactose intolerance. It prevents flatulence. Has been shown to protect the pancreas. Has been shown to reverse dermatitis.

Oxabacter Formigenes reduces oxalates and reduces pain. It is the primary oxalate degrading bacteria in the gut.

Lactobacillus Paracasei inhibits infection and helps reduce ammonia producing bacteria. It is a subspecies of Lactobacillus Casei which has many of the same benefits. It also prevents anxiety but not depression. L paracasei especiall ssp Casei prevents obesity. L Casei reduces the duration of infections. L Paracasei helps prevent allergies. L paracasei and ssp L Casei should not be taken by those with high histamines. It prevents halitosis and cavities. It has been shown to protect the nasal cavities, mouth and throat from infection.

L Casei protects us from pathogens that cause diarrhea and antibiotic induced diarrhea. It improves colon health and inceases the commensal bacteria that help prevent depression and anxiety. Helps protect the gums from infection. Has been shown to protect the health of the pancreas. Increases IL-10 and TGF-B.

Lactobacillus Casei ssp shirota prevents constipation. Increases serotonin. It improves mood and prevents depression. It has the best long term effects at improving mood.

Lactobacillus Brevis prevents urinary and intestinal infection by regulating the PH of the digestive system and renal system. It helps keep it from getting too akaline. Lactobacillus Brevis improves cellular immunity it protects the gut from excess bile acids and keeps H Pylori commensal. It produces natural antibiotics that protect the gut from pathogens.

Streptococcus Thermophilus is needed by most of the gut bacteria to get established especially lactobacillus debrueckii. S Thermophilus helps with lactose intolerance. It prevents cavities and infection in the nose, throat and mouth. Helps prevent inflammatory bowel diseases. It accelerates healing in the gut.

Lactobacillus Debrueckii is needed to establish the commensal microbiome and to prevent C Diff infection. It also prevents inflammation. It is found in butter milk. It also helps keep H Pylori commensal. It helps degrade milk proteins. It also helps prevent liver disease. L Debrueckii also prevents fungus infection. It also prevents obesity.

lactobacillus Plantarum is needed to balance our gut bacteria which helps prevent dysbiosis. It also helps prevent diabetes. Helps prevent candida and fungus infections. Helps prevent inflammatory bowel diseases. It reduces HIV, enhances memory and reduces brain inflammation. Reduces abdominal pain.

Saccharomyces Boulardii helps prevent autoimmunity, protects from diarrhea caused by pathogens. Helps keep H Pylori commensal. Helps prevent inflammatory bowel. Saccharomyces Boulardii helps with gluten intolerance and reduces symptoms of SIBO.

Bifidobacterium bifidum helps in the production of many B vitamins. Prevents celiac diseas, milk allergies and many other food sensitivities. Reduces histamines. Improves immune function. Prevents ulcers and diarrhea. It is important for vaginal homeostasis. Has been shown to reduce symptoms of inflammatory bowel diseases. Prevents constipation and lung infection. Prevents pouchitis and infections in the lining of the intestines. Has been found to improve immune function. Prevents eczema. It also produces the B vitamins common to Bifidobacterium but also produces vitamin K2. It helps those who do not produce enough lactase because it breaks down lactose. Increases red blood cell production helping to prevent anemia. Has been shown to reduce the severity of the flu and common colds.

Bacillus Coagulans found in the soil , it improves bowel movements, helps with inflammatory bowel diseases, reduces bloating and pain in the digestive system. It also decrease the inflammatory C-reactive protein which is high during infection. It reduces intestinal gas. Reduces the risk of infection especially by influenza. Has been shown to reduce arthritis symptoms. It has been shown to help with gluten intolerance and allergies. It has been shown to reduce symptoms of SIBO. It has been shown to prevent food born pathogens. Is effective at fighting a broad range of pathogens. It reduces symptoms of arthritis if it has an adequate supply of inulin.

Saccharomyces Cerevisiae reduces oxidative stress and free radicals including hydroxy radicals and prevents excess nitric oxide production. Helps prevent iron toxicity. It stimulates the good inflammatory cytokines while inhibiting the bad ones. It helps in developing humoral immunity. Can reduce candida infection but if taken in excess will cause symptoms that are exactly the same as candida infection and is often times more common in those who are believed to have candida infections in the bladder. It helps those who have phenylketonuria or proteinuria it breaks down proteins like phenylalanine. Saccharomyces Cerevisiae prevents acne.

Lactobacillus gallinarum prevents urinary tract infection and reduces oxalates. It reduces symptoms of allergy. It helps break down phytic acid preventing it from being an antinutrient.

Bacillus Subtilis found in soil protects and heals intestinal epithial cells. It is improtant in the proper absorption of nutrients. If deficient in B Subtilis you will suffer from Malabsorption syndrome. It helps keep our T cells balanced. It is needed for digestion of carbohydrates. Has been shown to keep H Pylori commensal and fight food born illness. Has a broad range of antimicrobial properties.

Lactobacillus Helveticus is found in cheeses like parmesian, cheddar, swiss cheeses, buttermilk and cheddar cheese. Protects the gut health and is a butyrate producing bacteria. It reduces neurological inflammation and restores cognitive function. It helps prevent anxiety and depression. It improves sleep and prevents lung infection. It reduces parathyroid hormone and improves calcium metabolism. It improves learning and cognition. It fights candida and prevents dermatitis. It fights cancer and reduces inflammation. L Helviticus also prevents lung infections. It is and ACE inhibitor so prevents high blood pressure. It is important for whole body health and protects the liver and kidneys. It helps prevent lactose intolerance. It reduces anxiety and promotes the feeling of well being. It prevents mood swings and aggressive behavior. It helps prevent depression.

Bifidobacterium Longhum helps prevent anxiety and depression, and improves cognitive function, it helps prevent viral infections and symptoms of ulcerative colitis. B Infantis is a subspecies which has been shown to protect against polio. B Longhum protects the lungs from infection. It prevents food born illness and prevents candida from becoming pathogenic. It reduces symptoms of gout and prevents inflammation. It prevents allergies and celiac disease. It reduces endotoxins and prevents fatty liver disease. It increases biotin levels. It reduces bloating in the gut especially ssp Infantis. B Longhum improves sleep and prevents anxiety. Reduces depression caused by stress by reducing cortisol. It prevents liver disease and produces B12 and Folate.c It improves bone health and fights cancer. It decreases TH1 and TH17 cytokines. B Longhum also reduces aggressive behavior. B Longhum improves nutrient absorption. Reduces histamines. B longhum stimulates the vagal nerve.

B Infanis increases tryptophan. Decreases bloating. Bifidobacterium Longhum also helps prevent lactose intolerance. It detoxes serotonin metabolites. It decreases adrenalin levels and restores the HPA axis. It reduces inflammation and increases lifespan. It prevents ulcers. It helps prevent lactose intolerance. Increases IL-10 and IL-1B which seems contridicting but IL-1B is needed to increase intestinal motility. IL-10 keeps IL-1B from causing inflammation and immune issues.

Bifidobacterium Infantis increases tryptophan, serrotonin and GABA precursors. Helps prevent inflammatory bowel diseases. B Infantis increases T regulatory cells which helps keep the immune system balanced. B Infantis promotes the production of IgA which is usually low in those with malabsorption and inflammatory bowel disease.

B Infantis reduces histamines. B infantis decreases intestinal bloating, pain and gut distention (enlarged or inflammed). B Infantis increases tolerance to pain. B Infantis has been shown to protect the health of the pancreas.

Bifidobacterium Breve helps protect from food born pathogens and diarrhea. It also helps prevent allergies. Has been shown to improve intestinal health. Reduces anxiety and improves cognition. Reduces histamines. It helps the body absorb nutrients. It reduces bloating and inflammation. Prevents obesity.

Bacteroides Thetaiotaomicron secrete natural antibiotics which keep the gut balanced. It is also responsible for innate immunity in the intestines. It reinforces the mucous membrane. It reduces inflammation. It also helps break down carbohydrates. Prevents constipation and improves bile production. But high levels can promote Clostridium infection.

Bacteroides Ovatus helps break down carbohydrates and feeds other commensal bacteria. It breaks down the most difficult fiber that none of the other microbiota can.

Lactobacillus Rhamnosus helps prevent anxiety and depression by upregulating GABA. L Rhamnosus also prevents lactose intolerance, asthma and allergies. It also prevents skin rashes and eczema. L Rhamnosus also prevents urinary infection. Helps restore normal vaginal and bladder microbiome. Helps prevent candida and fungul infections. Helps prevent inflammatory bowel diseases. Reduces oxalates. Prevents food sensitivities. Breaks down histamines. Reduces endotoxins and inhibits biofilm formation. It simulates phagocytosis which helps fight infection. Phagocytosis is inhibited in those with immune deficiency. Reduces histamines. Rhamnosus improve bowel movements by increasing intestinal motility. Has been shown to prevent chronic fatigue.

Lactobacillus Acidophilus prevents excessive weightloss and reduces inflammation. Has been shown to reduce symptoms of arthritis. L Acidophilus increase CB2 receptor expression. Prevents urinary and bladder infection and helps keep the ph of the bladder and intestines balanced. Helps prevent candida and fungul infections. Helps prevent inflammatory bowel diseases. Prevents celiac disease, milk allergies and food sensitivities. L acidophilus helps with FODMAP intolerance and has been shown to reduce SIBO. It reduces pain by stimulating the opioid receptor. Helps prevent acne. Helps prevent allergies and food intolerances. Helps prevent infection in the bladder and intestines by balancing the ph. If we become too alkaline it promotes pathogen growth. It also prevent vaginal infections. Has been shown to protect the health of the pancreas. Increases IL-10.

Mycobacterium Vaccae helps prevent brain inflammation, anxiety and depression. It also improves cognitive function. It is found in healthy soil in forest among decaying folage. Supposedly eating leaves from a plant can give you this. It induces a strong T cell response when first establishing in the body and then slowly declines as it gets established. Once established it increases T regulatory cells. It helps fight tuberculosis.

Almost all bifidobacterium prevent depression and anxiety but can cause weight loss so those who are under weight my want to be cautious in taking these in excess. Red Wine increases Bifidobacterium. The bifidobacterium also decreases adrenalin levels.

Sophora has been found to increase most of the bacteria that prevent anxiety and depression.

Lactobacillus Iners promotes vaginal dysbiosis so should be avoided , high levels can cause miscarriage. It increases risk of contracting sexually transmitted diseases. One good thing about it is it prevents HPV infection.

Lactobacillus Jensii reduces the risk of contracting sexually transmitted diseases and renal infection. It helps with the break down of milk. It reduces the population of other Lactobacillus which can help with obesity. Lactobacillus Jensii produces chemicals that inhibit HIV. Helps restore normal bladder and digestive microbiome. Helps protect from HPV infection. It helps maintain the proper PH of the intestines and the bladder.

Lactobacillus Crispatus causes weight loss in those who are obese and protects from infections in the renal system, bladder and prevents sexually transmitted diseases. It helps keep the ph of the bladder and digestive system balanced. Helps restore normal gut and bladder microbiome. Helps protect from HPV, HIV and many other types of infection. It prevents vaginal odor.

Lactobacillus Johnsii requires purines to survive so needs purine producing commensals or purines consumed in the diet. It produces natural antibiotics that protect the gut from infection and prevent H Pylori and Candida from becoming pathogenic. It has been shown to thicken the mucous membrane in the gut and helps heal peptic ulcers. It restores the proper number of IgA, IgG and CD8+ cells which are low in tick born illness and inflammatory bowel and malabsorption disorders. It helps prevent skin lesions. It has been shown to reduce diabetes and even reverse it in some. L Johnsii prevents insulin resistance and allergies. It also prevents vaginosis. Those with interstitial cystitis or high TH17 levels would want to avoid this one because it increases TH17 levels along with COX2 which is high in interstitial cystitis, psoriasis, and lupus. It would help restore nutrient absorption in those with malabsorption.

Lactobacillus Kefiranofacians is found in kefir and fermented milk. It prevents cavities and biofilm formation. It does not survive in the gut long so you would have to gargle with it. It also helps with constipation. It stimulates the intestines to produce more mucin increasing the mucous membrane in the gut which helps with colitis. Those with high TH1 levels would want to avoid it because it increases TH1 levels.

Lactobacillus Kimchii increases phagocytosis which would not be good in those with a hyper immune system but would help those who have an inhibited immune system. It is found in kimchi. Kimchi also contains Lactobacillus Sakei which inhibits biofilm formation.

Lactobacillus Plantarum has potent antioxidant abilities. It helps maintain proper intestinal permeability and helps with malabsorption disorders. It produces antimicrobials that fight gram positive and gram negative bacteria. It accelerates gut repair. It helps with chron’s and inflammatory bowel disease. It reduces skin rashes and eczema. It has been shown to help with diabetes. It prevents diabetes and high blood pressure. L Plantarum also prevents biofilm formation. L Planatarum increases muscle mass, muscle strength and endurance. Helps prevent candida and fungul infection. Helps prevent inflammatory bowel diseases. Reduces oxalates. Breaks down histamines. L Plantarum improves intestinal epithial health. It produces L-Lysine which improves our bodies ability to use calcium. It has been shown to improve mental health. It is improves the absorption of nutrients into the body. It helps remove toxins from the body.

Lactobacillus Pontis increases NOD2 which fights viruses but is not good for those with inflammatory diseases or inflammatory bowel disease.

Bifidobacterium Adolenscentis helps break down milk proteins, promotes normal bowel movements, produce many of the same vitamins that most Bifidobacterium produce which includes B1, folate, B12, biotin and riboflavin. It also produces vitamin C but not in high enough amounts to provide the body with adequate levels of vitamin C. It like most Bifidobacterium dephosphoralizes phytic acid. Which prevents the antinutrient effect of Phytic Acid. If a person is low in Bifidobacterium then phytic acid will deplete their bodies of nutrients. It helps fight Coxsackievirus and other viruses. If a person is deficient in Bifidobacterium they are more prone to Norovirus infection. It along with most bifidobacterium prevents obesity, cardiovascular disease and diabetes.

Streptococcus Salvarius prevents infection in the throat nose and mouth. It also produces natural antibiotics that kill harmful bacteria. Prevents food allergies. It also prevents lung infection.

Streptococcus Mitis prevents infection in the throat nose and mouth.

E Coli Nissle prevent E Coli infection, prevents halitosis, helps prevent infection in the mouth , throat and nose. Helps with inflammatory bowel diseases. E Coli Nissle protects us from it’s pathogenic cousins. It also protects from other food born illness.

Lactobacillus Salvarius prevents cavities and prevents biofilm formation and prevents dental plaque. Helps prevent fungul infection and candida.

Lactobacillus Coagulans (Lactobacillus sporogenes ) helps prevent inflammatory bowel diseases. Has been shown to prevent diabetes. It enhances protein absorption and increase muscle healing, improves muscle recovery time and increases endurance. It inhibits fibrosis which would help with fatty liver disease and COPD. It increases butyrate producing bacteria. It decreases abdominal pain. It requires oligosaccharides. It improves bowel motility which prevents constipation. It reduces symptoms of inflammatory bowel diseases. It helps improve feeding tolerance. In other words it helps restore your appetite.It prevents parasite infections and has been shown to protect against the flu and adenovirus. It has been shown to reduce vaginosis. It also protects from many pathogens that cause diarrhea.

Lactobacillus Gasseri prevents halitosis. Helps restore normal bladder and gut microbiome. Reduces oxalates and histamines. Helps protect from HPV infection. It reduces menstrual pain. Reduces allergies and asthma. Helps break down phytic acid preventing it from being and antinutrient.

Bifidobacterium Animalis prevents food allergies and reduces oxalates. Prevents constipation speeds up food transit time. It prevents bloating, nuero inflammation, oxidative stress, and increases serrotonin, dopamine and norepineprhine by inhibiting MAO activity. Prevents obesity and anemia. It protects from polio and rotavirus. It reduces the length of the flu and prevents lung infection. I reduces allergies but increases TH1 levels. It reduces inflammation and increases T regulatory cells. It increases good gut microbes and decreases the bad. Improves digestive health. Prevents diarrhea and constipation. Helps with colitis and inflammatory bowel disease. It enhances immunity. It helps prevent celiac disease. It degrades oxalates. It improves nutrient absorption. It reduces stress hormones helping to reduce anxiety.

Bifidobacterium Adolescentis prevents food allergies and reduces oxalates. It prevents diarrhea from pathogens and prevents constipation. It helps protect from the rotavirus. Prevents asthma. Inulin increases B Adolescentis. It is fed by F Prausnitzii. It helps reduce fatty liver disease.

Akkermansia Muciniphila helps prevent obesity and helps to produce short chain fatty acids and is usually low in those will malabsorption issues. Deficiency in Akkermansia Muciniphila can lead to diabetes. Akkermansia Muciniphila also protect us from inflammation. It is important in homeostasis in the gut. It also produces oligosaccharides which feed our good gut microbes. It helps produce SCFA which are needed by the body and our microbiome. It helps maintain the shape and health of the mucous membrane in the gut. Low levels of Akkermansia Muciniphila results in a thinner mucous membrane making us more prone to infection and inflammatory bowel diseases. A deficiency in Akkermansia can result in appendicitis. Arabinoxylin, Inulin , fructoligosaccharide, oligofructose increases Akkermansia. Polyphenols in pomegranate, grapes, grape seed extract , and navy beans increase Akkermansia. Cod liver oil also increases Akkermansia. When there is a wound in the gut Akkermansia will go to the site of the wound and signal the body it needs to repair that area. This is one of the most important microbes for gut health. If we are deficient in it bacteroidetes leves get to high, bile production becomes inhibited and our bodies do not secrete pancreatic enzymes. I discuss the consequences of high bacteroidetes levels at the end of this post. Increased CB1 receptor activation reduces Akkermansia, inhibiting CB1 receptor increases Akkermansia but inhibiting CB1 increases depression and anxiety. Akkermansia needs Faecalibacterium Prausnitzii and vice versa. There is research showing if Akkermansia levels get too high it can increase zonulin levels so though it is a key mcirobiota in the regulation of our health homeostasis should always be the goal.

Clostridium Butyricum help prevent many food born pathogens, helps produce short chain fatty acids, it prevents diabetes and helps keep the sulfur digesting and ammonia producing bacteria like Bacteroidetes and Firmicutes from getting too high. If those are high a person can develop diabetes, malabsorption from inhibited bile production and inflammation. It prevents insulin resistance. Clostridium Bytyricum also protect from bartonella.

Faecalibacterium Prausnitzii Faecalibacterium a deficiency can lead to irritable bowel syndrome. Produces butyrate from fiber. A deficiency in F Prausnitzii can lead to asthma, obesity, depression ,Chohn’s disease and inflammatory bowel diseases. A deficiency in this can lead to high TH17 levels resulting in psoriasis. Those with cardiovascular disease and Type 2 diabetes are usually low in F Prausnitzii. Akkermanis Municiphila needs it and vice versa. Prevents inflammation.

It also helps balance the immune system. It needs Akkermansia to thrive. Oligosaccharides increase F. Prausnitzii. It prevents celiac disease. It induces IL-10. It is necessary for fatty acid oxidation. It produces butyrate. It produces Salicyclic acid which is what they make aspirin from. It produces raffinose a type of oligosaccharide that decreases gut permeability which prevents leaky gut. It along with other commensals form biofilms that help protect and heal the gut. Decreases zonulin which preserves the integrity of the tight protein layer. If zonulin levels get too high a person will develop lactose, gluten and gliadin intolerance.

Enterococcus faecium prevents listeria infection and prevents infection from it’s pathogenic cousins. There is a human species which is non pathogenic and an animal species and the animal species is pathogenic to humans. I view this one as a dangerous pathogen even though it is used in probiotics when the body is weak it can make a person very very ill.

Weissella Cibaria also prevents halitosis, cavities, and this one also reduces skin lesions. It also reduces Hydrogen Sulfide and inhibits biofilms. Weisella Cibaria is found in kimchi and fermented milk. It prevents inflammation caused by endotoxins. It also prevent Nirtic oxide induced by endotoxins and promotes the healing of intestinal epithelial cells. It inhibits biofilm formation of pathogenic microbes.

Preovotella Histicola reduces arthritis, increases T regulatory cells and IL-10 which help keep the immune system balanced and reduces TH17. These are often a problem in those with tick born illness or mycoplasma infection. Reduces allergies.

Collinsela Aerofaciens increases intestinal PH which prevents pathogens and keeps candida and H Pylori in their commensal forms. It has been shown to prevent irritable bowel syndrome. It requires maltose, lactose or glucose. Whole grains increase C Aerofaiens. It prevents arthritis by inhibiting IL17.

Lactobacillus Bulgaris increases life span. Helps maintain the proper PH of the bladder and intestines which prevents infection and dysbiosis. Prevents the bladder and intestines from becoming alkaline. If they become alkaline candida and H pylori will go from commensal to pathogenic. It balances the microbiome in the digestive system. It also helps prevent lactose intolerance. It helps prevent liver disease and has been shown to reduce the risk of getting the common cold. It prevents dermatitis and eczema. It has been shown to help with inflammatory bowel disease. It prevents tooth decay and also prevents infection in the intestines and prevents pouchitis. It prevents constipation. It helps neutralize many toxins.

Odoribacter Splanchnicus a loss of Odoribacter causes a loss of SCFA availibility which leads to inflammation and low glucose levels. Deficiency in O Splanchnicus can lead to hypertension and diabetes. Low levels of O Splanchnicus can also lead to interstitial cystitis. It is important for absorption of nutrients and in maintaining a healthy gut. Has been shown to prevent atherosclerosis. Requires glucose, galactose, salicin, trehalose, arabinose, fructose or mannose. Inhibits many of the sulfur digesting bacteria that can cause high sulfite levels and high hydrogen sulfide levels. O Splanchnicus also breaks down phytoestrogens found in many plants.

Lactinifactor Longoviformis breaks down phytoestrogens found in many plants.

Arthrobacter Agilis it produces carotenoids which the body can convert to vitamin A. It reduces the risk of Parkinson’s disease. They degrade many pesticides. It prevents fungus infection but I am not comfortable with Arthobacter species because some of them produce antifreeze and I cannot find any research to show with this one did or not. I do not feel this is a safe probiotic and I have not spoken to anyone who had used it.

Eubacterium Halli it produces butyurate from acetate, glucose and lactate. It produces vitamin B12. It is important for homeostasis in the body and produces SCFA. It improves insulin sensitivity and normalizes blood glucose levels. It cannot process complex carbohydrate and needs bifidobacterium to exist. It makes some carcinogens harmless.

Arthrobacter Globiformis uses sugar as it’s main source of food. It uses sugar and ammonia. It’s byproducts are nitrogen and hydralimine. I do not know the health effects of these but it can break down many toxins in the enviroment but I do not feel comfortable using these as a probiotic I have not seen enough research on the use of this. Their are many of the Arthrobacter species that are used for probiotics and almost all of them break down some form of toxin but I cannot find research on their safety or effectiveness.

Pediococcus acidilactici it has been shown to reduce gastrointestinal distress. It prevents infections by food born pathogens and has been shown to stop bloody diarrhea. It also prevents constipation. Has been show to stop excessive vomiting. It has been shown to fight pathogenic parasites. It increases IL-10 and T regulatory cells which would balance the immune system. It has also been shown to fight fungal infections.

Most Bacillus species convert genotoxic substances to non toxic substances. Bacillus species are found in the soil and in humans. Some can be pathogenic. Man soil based bacteria improve nutrient absorption. There are other strains of Bacillus species but I did not list them because they have the ability to produce endotoxins. Bacillus species help break down food better which improves nutrient absorption. They should be taken with food or they do not get established well. Many of the Bacillus species secrete amylase and lipase. Amylase helps break down carbohydrates and lipase breaks down fats. Bacillus species may help those with malabsorption issues. Bacillus species detox a lot of toxins including mycotoxins found in fungus and molds. Mycotoxins can cause birth defects, sterility, it can increase estrogen levels. Most bacillus species can detox mycotoxins zearalenone, and aflatoxin but other mycotoxins that get broke down are species specific. Most Bacillus species train the immune system on how to fight pathogens. Most bacillus species reduce the risk of diabetes and cardiovascular disease. Most bacillus species help prevent leaky gut and promote healing of the gut.

Bacillus Lacterosporous is found in soil and humans. It fights fungus. Helps prevent leaky gut. It also fights mycoplasma infection. I have not seen studies on the effectiveness or safety of this microbe.

Bacillus Firmis promotes the differentiation of B lymphocytes to Ig producing and secreting cells. It stimulates the repair of blood vessels.

Bacillus Clausii stimulates the production of IgA but requires GALT. Prevents lung infections has been used successfully to treat those who get recurrent respiratory infections. Has also been used successfully to treat acute diarrhea. Studies show it is safe for human consumption. It protects the body from endotoxins.

Bacillus Licheniformis prevents biofilm formation of pathogens. Prevents the build up of amyloid plaque which contributes to amyloidosis and Alzheimer’s. Amyloid can also destroy beta cells leading to diabetes.

Bacteroides Fragilis promotes the production of GALT.

Phages P. Aerugonosa protect against E Faicalis and many food born pathogens.

Bacteroidetes- there are many species. Meat consumption increases their numbers. If bacteroidetes get too high it can result in weight gain or weight loss from malabsorption. It can cause the inability to absorb fats preventing bile production. It can cause the pancreatic enzymes to become inhibitited and cause phenylketonuria which results in high ammonia levels. It can cause BH4 enzyme deficiency, which can lead to CBS upregulation which can lead to high sulfite levels. This can cause the citric acid cycle to shut down leading to high estrogen levels, high unbound copper levels which farther inhibit the bodies ability to produce bile. This farther increases estrogen levels and levels of unbound copper. This lead to inflammatory bowel disease and malabsorption issues. A person with high Bacteroidetes levels will be high in butyrate and proprianic acid, acetate levels may be high also. They will be low in malanic acid. This also leads to high ammonia levels which causes many other health issues and causes Candida and H pylori to go from commensal to pathogenic. Many with this problem will develop bile acid gird. This also makes someone prone to clostridium infection along with many other pathogens.

If this persist long enough a person can develop interstitial cystitis. This is a common problem in those born by C section and who are formula feed. This also leads to a lot of food intolerances especially milk and glutin along with gliaden. This also can result in thiamine deficiency.

Consuming high amounts of meat can result in high bacteroidetes, methane producing bacteria and increased sulfur digesting bacteria. This can result in high levels of sulfite which will interfere with sulfation and cause many health issues. It can also cause high levels of hydrogen sulfide which will lower blood pressure at first then if levels get high enough it will increase blood pressure and cause severe inflammation. Bile production and production of pancreatic enzyme will become inhibited. High sulfite levels makes a person more susceptable to Salmonella infection. This also inhibits bile production. Butyrate ;producing bacteria help restore bile production.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5023267/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5953422/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5282957/

Another thing that inhibits bile production is extended use of antibiotics. It reduces our good gut microbiome. Muscrarlis Macrophages detect our good gut microbiomes LPS. With the decrease in our good gut microbiome and loss of their LPS to signal muscarlis macrophages dysbiosis occurs which leads to inhibited intestinal motility which causes a loss of bile production and pancreatic enzyme production. Supplementing with commensal LPS has been shown to reduce the symptoms and increase bile flow.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4149228/

https://www.cell.com/abstract/S0092-8674(14)00735-1

https://www.cell.com/cell/pdf/S0092-8674(14)00867-8.pdf

A loss of bile production prevents nutrient absorption, the pancreas will not receive the feedback from our intestines and will quit producing enzymes. This result in malabsorption especially of oil soluble nutrients because bile is need to break down fats. This will also cause LDL levels to get low and HDL levels to because high. This imbalance causes HDL to become inflammatory.

A loss of serrotonin producing gut bacteria negatively impact gut health. Tryptophan helps restore gut health. Strange thing is the first three or four days I took tryptophan I had a herx type reaction. It must have been from die off of the bad gut microbes as the good increased. This can lead to damage to the central nervous system.

http://www.pnas.org/content/115/25/6458

https://www.gastrojournal.org/article/S0016-5085(16)34896-X/abstract

Grape seed extract helps restore bile flow.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4817264/

If normal bile function is not restored it effects the whole body and can lead to diabetes.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6073382/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5319718/

https://www.frontiersin.org/articles/10.3389/fmed.2017.00163/full

Good articles on reducing candida when it turns pathogenic.

http://www.gestaltreality.com/2013/09/16/how-to-eliminate-candida-biofilms/

https://www.yeastinfectionadvisor.com/candidadiet.html

https://www.theguthealthprotocol.com/wp/the-alkalizing-myth

https://www.selfhacked.com/blog/treat-cure-candida/

https://www.thecandidadiet.com/candida-fighting-foods/

Sometimes people confuse candida with gut dysbiosis.

http://www.ei-resource.org/illness-information/environmental-illnesses/candida-and-gut-dysbiosis/

http://www.holistichelp.net/blog/candida-sibo-or-h-pylori/

If our ammonia levels get high then H Pylori will turn pathogenic to protect itself. When in commensal form it prevents allergies. When H pylori is in pathogenic form it inhibit ghrelin which inhibits digestion and can cause food to sit in the gut and ferment leading to bloating, dybiosis and can inhibit digestive enzymes.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3888205/

I am not going to cover histamines in this post I will address it in a post on over and under methylators because high and low histamines can cause over or under methylation. Leaky gut, inflammation and status of our immune system can effect methylation.

Now connect this with my other post and you will see that there is no doubt that germ theory and terrain theory are not correct and that our Facebook groups theory “Enveroment and Biome Theory of Health is correct.

Here is a list of my articles on health that will support my case.

Improtance of human photosynthesis in health.

https://iamajuicer.wordpress.com/2018/11/13/importance-of-human-photosynthesis-in-health/

Why so many are experiencing gender identity crisis.

https://iamajuicer.wordpress.com/2018/11/12/why-so-many-are-experiencing-changes-in-gender-identity-why-so-many-children-have-gender-identity-issues/

We can expect diabetes to rise because of all these things.

https://iamajuicer.wordpress.com/2018/07/21/diabetes-type-1-type-2-and-type-3c/

You can use the above mentioned information to help with hypertension.

https://iamajuicer.wordpress.com/2018/10/28/causes-of-hypertension-and-things-that-may-help/

https://iamajuicer.wordpress.com/2018/10/24/the-truth-about-heart-disease-cholesterol-lowering-drugsand-their-effects-on-mental-health-and-health-of-the-body/

https://iamajuicer.wordpress.com/2018/07/25/carditis-hypertension-tachycardia-and-many-other-cardiovascular-disease-all-have-a-common-tie-and-common-solution/

Compare the above mentioned things and the things that occur within the body and you can make the connection to the gut. This list the many things that can go wrong and how to use nutrients to help heal.

https://iamajuicer.wordpress.com/2018/10/12/my-summarized-notes/

Even allopathic medicine is contributing to the chronic illness and the poor health of modern day society so they are the bad environmental part.

https://iamajuicer.wordpress.com/2018/10/08/cause-of-flaccid-myelitis/

Even our brain gets effected.

https://iamajuicer.wordpress.com/2018/10/02/cant-sleep-feel-disassociated-could-be-your-pineal-gland/

https://iamajuicer.wordpress.com/2018/09/21/things-linked-to-alzheimers-and-chronic-illness/

https://iamajuicer.wordpress.com/2018/07/11/hyper-excitement-of-nmda-autism-also-known-as-encephalitis/

We are taught that things like genetics are inherited but it is our eating habits and microbiome that gets inherited and they are things that can be changed. Even asthma we are taught is inherited but I have seen many in my life correct it and live a normal life and never suffer from it again.

https://iamajuicer.wordpress.com/2018/09/22/causes-of-obesity-and-things-that-may-help/

https://iamajuicer.wordpress.com/2018/09/20/why-asthma-is-rampant-now/

We are told that our genes are written and cannot be changed but science is finding that is not true.

https://iamajuicer.wordpress.com/2018/09/02/1303/

Stomach problems they claim runs in families but it is actually the gut microbiome they inherited and can be corrected.

https://iamajuicer.wordpress.com/2018/09/02/the-microbes-that-help-heal-the-gut/

https://iamajuicer.wordpress.com/2018/08/21/things-that-may-help-those-who-have-the-more-difficult-digestive-problems/

Many have problems with lipid metabolism now days. They claim it is inherited genetics but when I ask people if anyone else in there family suffered from it they say no. So how can it can they inherit something no one else ever experienced in their families?

https://iamajuicer.wordpress.com/2018/08/21/things-that-may-help-with-lysosomals-storage-disease/

The above mentioned things should help with liver disease also.

https://iamajuicer.wordpress.com/2018/08/14/fatty-liver-cirrohsis-thrombosis-and-other-diseases-caused-by-fibrosis/

Many things like COPD are set off by infection or toxins. By now you should know that most supposed pathogens actually help the body unless we have too many toxins or we are lacking a nutrient.

https://iamajuicer.wordpress.com/2018/07/20/things-that-may-help-with-copd/

This is why cancer is so rampant. Cancer is pretty much caused by man and the environment men have created.

https://iamajuicer.wordpress.com/2018/07/29/cancer-what-causes-it-what-may-help-with-it/

https://iamajuicer.wordpress.com/2018/07/22/what-they-dont-want-you-to-know-about-cancer-and-why-so-many-children-are-getting-it/

Our enviroment and biome can effect our health by causing excess oxidative stress.

https://iamajuicer.wordpress.com/2018/08/02/oxidative-stress-the-antioxidant-systems-and-how-they-effect-our-health/

Now you can see why tick born illness is rampant. Thing that usually would not usually effect man is now causing illness. Infection indicates there is a nutrient deficiency or enviromental toxin or enviromental biome issue. Something is out of balance. Man is viewing symptoms like cancer, diabetes, and mental illness as the cause and they are symptoms of underlying problem.

https://iamajuicer.wordpress.com/2018/06/17/vaccinations-spread-and-cause-disease/

https://iamajuicer.wordpress.com/2018/10/08/cause-of-flaccid-myelitis/

https://iamajuicer.wordpress.com/2018/07/21/things-they-would-rather-you-did-not-know-about-lyme/

Vaccination are one of the biggest contributors of modern illness.

https://iamajuicer.wordpress.com/2018/07/13/identifying-vaccine-injury-and-its-cost-to-society/

This is why detoxing is so important now days. Even our food has become toxic. Organic helps reduce the impact of mans destruction of our environment and the human and planetary biome.

https://iamajuicer.wordpress.com/2018/07/14/detoxing-we-need-it-now-days/

https://iamajuicer.wordpress.com/2018/07/23/how-toxic-is-your-food/

https://iamajuicer.wordpress.com/2018/06/17/genetically-modified-foods-destroy-our-health-glyphaste-and-glufonisate-add-to-the-toxicity/

They know their science is fake so they use every tactic they can to hide that fact.

https://iamajuicer.wordpress.com/2018/08/11/tactics-used-by-corporate-science-to-deceive-people-into-no-asking-questions/

If you have read this then by now it have figured out it is not your genes but your enviroment, inner and outer biome and not your genes that effect your health.

https://iamajuicer.wordpress.com/2018/06/27/its-not-your-genes-it-is-your-gut-microbiome/

Histamine homeostasis is very important in fighting chronic illness.

https://iamajuicer.wordpress.com/2018/07/12/the-effect-of-high-or-low-histamines/

Since modern day illness is causing chronic illness by destroying our gut we need to work on restoring it to heal. Leaky gut causes endotoxemia. I listed in the microbe list above which ones reduce endotoxins. It also causes high oxalates so you will have to work on reducing them.

https://iamajuicer.wordpress.com/2018/06/28/leaky-gut-oxalates-and-more-supplement-information/

https://iamajuicer.wordpress.com/2018/07/08/dealing-with-endotoxemia-or-sepsis/

All these things are types of autoimmunity and we need to restore our immune system back to homeostasis.

https://iamajuicer.wordpress.com/2018/07/15/autoimmunity-what-causes-it-and-things-that-may-correct-it/

Interstitial cystitis and vaginitis are some of the worst autoimmune disorders to deal with because our modern day environment makes it difficult to acheive homeostasis in the areas effected.

https://iamajuicer.wordpress.com/2018/07/15/causes-of-vaginitis-thinning-or-atrophy-of-the-vaginal-walls-and-things-that-may-help/

https://iamajuicer.wordpress.com/2018/06/18/healing-interstitial-cystitis/

 

Constipation can lead to inflammatory bowel disease and inhibited bile productin and  is caused by an imbalance in our gut microbiome. It can lead to chronic illness.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4951383/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5872693/

I noticed that those with dysbiosis had issues when the consumed or took tryptophan. This study suggest that SERT might be upregulated in dysbiosis which wold explain why tryptophan made them worse. Sert is the serotonin transporter.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5583244/

https://www.nature.com/articles/s41598-017-10835-8

There are those who say but things like H Pylori cause illness. So how could that prove what your are saying. H Pylori just like many of our beneficial bacteria only cause problems when something has changed to cause it to occur. They say yeah but there is strains that are pathogenic and strains that are not. Well the biggest part of the population is believe to have the supposed pathogenic strain of H Pylori. So you have to ask why doesn’t everyone get gastric ulcers?

https://www.frontiersin.org/…/10…/fmicb.2018.00609/full

Even our good gut bacteria can cause illness if we have digestive problems.

https://www.sciencedirect.com/science/article/pii/S1198743X14618838

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4490230/

Our food and water is so toxic now it has a negative impact on our guts. The crazy thing is some of these toxins are found in vaccines so imagine what they are doing when they are being directly shot into peoples blood streams.

https://www.mdpi.com/2076-2607/6/2/53/htm

Desulfibrio species digest sulfur which produces H2S. If H2S levels get too high it can cause many health issues. B Thetamiomicron free sulfur which feeds Desulfibrio species. They cannot free it themselves. Mercury and lead increase Desulfibrio species. Excess H2S can lead to constipation. This is why high levels of Akkermansia and Desulfibrio results in inflammatory bowel diseases, gall stones and many other diesease. Not getting enough fermentable carbohydrates increases sulfur digesting microbes.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1233901/

https://www.ncbi.nlm.nih.gov/pubmed/26491870

https://www.ncbi.nlm.nih.gov/pubmed/19709217

https://www.tandfonline.com/doi/abs/10.3109/00016357.2013.770163

https://www.frontiersin.org/articles/10.3389/fmed.2017.00163/full

It is listed among the bacteria that increases the risk of heart disease and diabetes.

https://www.ncbi.nlm.nih.gov/pubmed/29800124

Glycomacropeptide found in whey protein and fermentable fiber reduces sulfur digesting bacteria. Fermentable fibers are pectin, Beta-glucan found in mushrooms and oatmeal, guar gum, inulin and oligosaccharides. If a person is not used to getting them they will have to ease into them. Until the body is used to getting them they will cause bloating and gas. As the body gets used to them the symptoms will slowly decrease. Psyllium should be avoided it has been found to make the symptoms worse.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4593820/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6190755/

Those with inflammatory bowel and gut dysbiosis usually have high levels of H2S being produced by their gut microbes. Fructooligosaccharide and Resistant starch decreases H2S but psyllium increases it so psyllium should be avoided.

https://www.ncbi.nlm.nih.gov/pubmed/29561196?fbclid=IwAR3wOZijtOeO0NF_4liAPIZwHwiK-bAqMn4IsPFQNQ1PbkuJU0cydwzuFs0

Strange lactulose is in raw milk increases Hydrogen production but it helped me.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6201941/

Now we do not want to completely rid ourselves of the H2S producing microbes because they are needed to keep us health. We want to try and restore homeostasis. For those with high sulfur digesting bacteria a glass of non sulfur wine may help.

https://www.fasebj.org/doi/abs/10.1096/fasebj.31.1_supplement.855.3

High H2S levels can effect sulfation by inhibiting sulfur detoxification. It can even effect the antioxidant system. High H2S levels also inhibits nNOS. It can be countered by increasing NADPH and BH4.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6040266/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6210431/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4599001/

Methane producing bacteria can also cause constipation leading to inflammatory bowel diseases. Those with high methane levels usually suffer from nausea, will feel full and bloated, may experiencing vomiting. They will have milk intolerance because the sugars in milk feed methane producing bacteria. They will experience bouts of severe depression. Constipation causes bile to become inhibited resulting in similar health problems as those who have high sulfur digesting bacteria.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5987281/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5544731/

For those with dysbiosis from high methane producing bacteria should not drink alcohol it can make it worse.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5544731/

Those with methane producing dysbiosis need to avoid fermentable carbohydrates and lactulose found in milk products. I know those feed the good gut bacteria but they also feed the gut bacteria that produce hydrogen which feeds the methane producing bacteria.

https://bellalindemann.com/treat-constipation-causing-methane-sibo/

Methane producing bacteria out compete Sulfur digesting bacteria for H2 unless sulfate is present.

https://gut.bmj.com/content/32/12/1498

This surprised me the same microbes that feed the sulfur digesting bacteria also feed the methane producing bacteria. Firmicutes and bacteroides is high in both types of dysbiois.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC442992/

This is another commonality that I have found with those who have inflammatory bowel from too many sulfur digesting and too many methane producing is they both had low bacteroides fragilis levels. I am cautious recommending this because if level get too high it can cause health problems.

https://www.hindawi.com/journals/bmri/2016/5828959/

Bacteroides vulgatis and Bacteroides Dorei are usually low in both types of inflammatory bowel and can lead to cardiovascular disease. Seems there is an easy fix for this. Eating walnuts. This should help Both types of inflammatory bowel issues.

https://www.ahajournals.org/doi/10.1161/CIRCULATIONAHA.118.033714

https://www.fasebj.org/doi/abs/10.1096/fasebj.29.1_supplement.1006.1

Excessive methane production or excessive hydrogen production can cause malabsorption. So both should be measured in those with malabsorption issues.

http://iopscience.iop.org/article/10.1088/1752-7155/7/2/024001/meta

Alcohol consumption should be avoided with methane producers because it increases methane.

https://www.nature.com/articles/s41598-017-07637-3

The gut microbes are dramatically different in those with NAFLD.

When you look at studies on cirrhosis of the liver. The things that help NAFLD seem to be things that improve oxidation which leads me to believe they are low oxidizers. But alcohol liver disease seems more inflammatory. But they both have links to the gut. Very interesting report.

https://www.mdpi.com/2072-6643/10/10/1457

If a person craves sugar it may mean their lactobacillus acidophilus levels are too high.

Microbes interact with our mitochondria including our gut microbes.

https://academic.oup.com/femspd/article-pdf/74/1/ftv096/10749982/ftv096.pdf

Chemicals in our environment and those pushed by the pharmaceutical industry change our external environment which is killing the commencile pathogens that keep the pathogenic ones in check. This is a common theme now days. When someone gets and infection they either have high toxin levels, were taking allopathic medications or had a nutrient deficiency. All those effect our commensals that protect us from their pathogenic cousins.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4510460/

Some functional food that help straighten the gut out.

https://www.frontiersin.org/articles/10.3389/fmicb.2017.02146/full

https://www.frontiersin.org/articles/10.3389/fvets.2018.00166/full

 

Probiotics and their effects on autoimmune disease.

https://www.mdpi.com/2072-6643/10/10/1537/htm

And yes autoimmunity can lead to mental illness that is why vaccine damage the brain.

https://onlinelibrary.wiley.com/doi/full/10.1111/imm.12943

Using the information on probiotics above you can see the connection between the gut and arthritis.

https://www.mdpi.com/1422-0067/19/9/2508

Those with Trimethylaminuria may be deficient in sulfur digesting bacteria. This would reduce TMAO in the plasma. Could Trimethylaminuria be from a deficiency in methane producing and enterobacteriaceae?

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4239492/

https://www.nature.com/articles/ismej201772

https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-018-0461-0

How microbes effect neurological stress.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5736941/

This report shows why it is important to address leaky gut and gut dysbiosis. It can damage the kidneys.

https://www.mdpi.com/2072-6651/10/7/300

Methylation issues must be addressed before you can get your gut to heal.

Overmethylators

http://www.mensahmedical.com/common-symptoms-of-overmethylation/

Undermethylators.

http://www.mensahmedical.com/common-symptoms-of-undermethylation/

IL-22 is needed to protect us from pathogens and to stimulate FUT2. If we are deficient in certain gut microbiota that stimulate FUT2. We will have immune issues and gut dysbiosis because FUT2 keeps our good gut microbes health.

http://www.traceyreed.ca/blog/2016/4/12/fut2s-role-in-gut-healths-role-in-gut-health

https://www.sciencedirect.com/science/article/pii/S0022283615006051

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4774895/

ILC3 is needed for our gut microbiome to communicate with the body to increase FUT2. ILC3 is secreted by our gut microbiome.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4774895/

http://science.sciencemag.org/content/345/6202/1254009.long

https://www.researchgate.net/publication/260808789_Microbiota-Dependent_Crosstalk_Between_Macrophages_and_ILC3_Promotes_Intestinal_Homeostasis/download

Oligosaccharide helps if someone is deficient in FUT2

https://nutritionfacts.org/2013/01/10/boosting-gut-flora-without-probiotics/

https://www.newhope.com/ingredients/oligosaccharides-revealing-more-health-benefits

If the immune system is out of balance IL-22 can be upregulated causing illness. This is why the microbiome that increase T regulatory cell and decrease inflammation are important and reducing endotoxins is also important.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4710696/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6117408/

https://www.dovepress.com/profile-of-interleukin-22-in-gut-mucosal-health-and-disease-peer-reviewed-fulltext-article-IJICMR

https://www.sciencedirect.com/science/article/pii/S0925443914001513

IBS with constipations is IBS-C, IBS with diarrhea is IBS-D, IBS that is mixed is IBS-M. Most I have met have IBS-C and it is why I post on constipation a lot.

5-HT(serotonin) helps regulate gut motility.

https://www.ncbi.nlm.nih.gov/pubmed/25954931

Lactobacillus Rhamnosus GG increases 5-HT uptake .This would help those who have diarrhea but will decrease motility adding to the problem for those who have constipation type inflammatory bowel. 5-HT plasma levels in those who have diarrhea is low and in those who have consipation it is high. E Coli Nissle 1917 increases 5-HT bioavailibility. F Prausnitzi A2-165 down regualates 5-HT which may help those with constipation type inflammatory bowel. Some of the studies were done poorly but there is useful information in them. They also list some microbiota that can improve motility.

https://www.wjgnet.com/1007-9327/full/v24/i3/338.htm

https://www.wjgnet.com/1007-9327/full/v22/i36/8137.htm

https://www.ncbi.nlm.nih.gov/pubmed/28871143

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5583244/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4951383/

There are three forms of IBS. IBS-D involves diarrhea, IBD-C involves constipation and IBD-M is a mix of both. Serotonin regulates gut motility and enzyme secretion. Damage to the digestive system and leaky Gut effects GLP-1’s ability to sense nutrients. 5-HT is involved in the regulation of gut motility and enzymes. It depends on GLP-1 and serotonin. Gut our gut bacteria regulate serotonin and GLP-1. The type of microbes involved in the dysbiosis determines which type of IBS a person will suffer from.

https://www.sciencedirect.com/science/article/pii/S2212877818301406

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4263172/

Healing the brain and addressing high zonulin levels and restoring the gut bacteria and addressing neurological issues are necessary to restore proper gut brain communication. Inflammation must also be addressed.

https://www.frontiersin.org/articles/10.3389/fnins.2018.00049/full

http://www.mdpi.com/1424-8247/11/3/63/pdf

How metabolic issues disrupt the communication with our gut.

http://jem.rupress.org/content/213/10/2129

Our genes communicate with our gut bacteria.

http://jem.rupress.org/content/215/8/1965.long

http://cancerres.aacrjournals.org/content/77/8/1783

Our genes can be altered by our environment and what we put in them.

https://iamajuicer.wordpress.com/2018/09/02/1303/

A good article on the immune system and our gut.

https://www.karger.com/Article/FullText/484687

 

 

Causes of Obesity and Things That May Help.

This is not medical advice I am posting this for educational and informational purposes.

They blame genetics for obesity. Many things caused by modern medicine and toxins they blame on genetics. Also it is our life styles and eating habits that we inherit from our families that influence our health. If you read some of my post you would see that most things are not genetic as they falsely claim.

They constantly blame genetics but if you do your research you would see that our gut microbiome modulate our genes and if you are lacking a certain microbiota the genes it modulates will be effected. I have posted on it is not your genes but it is your gut and gut microbiome. A change in our microbiome from farm chemicals in our food, BT Toxins from GMOs, antibiotics and other pharmaceuticals and heavy metals can change our gut bacteria. This can result in obesity.

https://genomemedicine.biomedcentral.com/articles/10.1186/s13073-016-0294-z

https://chriskresser.com/9-steps-to-perfect-health-1-dont-eat-toxins/

https://molecularautism.biomedcentral.com/articles/10.1186/s13229-017-0121-4

https://www.aap.org/en-us/about-the-aap/aap-press-room/Pages/AAP-Says-Some-Common-Food-Additives-May-Pose-Health-Risks-to-Children.aspx

To prevent children having a life full of illness it is important to make sure they develop a balanced gut microbiome while young.

https://thevaccinereaction.org/2016/09/role-of-the-microbiome-in-infant-development/

http://www.greenmedinfo.com/article/vaccinated-obese-adults-are-twice-likely-develop-influenza-and-influenza-illne

https://www.omicsonline.org/open-access/vaccine-induced-immune-overload-and-the-resulting-epidemics-of-type-diabetes-and-metabolic-syndrome-1747-0862.S1-025.php?aid=24058

Our environment effects our jeans. Also a childs health is determined by the bacteria they get will still and infant.

https://www.the-scientist.com/news-opinion/environment-not-genetics-primarily-shapes-microbiome-composition-30062

https://www.frontiersin.org/articles/10.3389/fimmu.2014.00427/full

We need to ask ourselves why has obesity , chronic illness and heart disease increased so dramatically? If modern medicine, TV and the government is right then our health should be improving not declining. Studies have shown that we eat far less fat and cholesterol in the U.S. then we did in the past and we eat more fruits and vegetables. So why are these conditions increasing?

http://www.diabetesforecast.org/2012/nov/more-kids-than-ever-have-type-2-diabetes.html?

https://www.selfhacked.com/blog/gut-bacteria-microbiome/?utm_source=ActiveCampaign&utm_medium=email&utm_content=ICES%2FPEMF%2C+Ceylon+Tea%2C+Gut+Microbiome+Affects+%2B+Management%2C+Purple+Sweet+Potato%2C+Myostatin%2C+Hyperbaric+Oxygen+Therapy&utm_campaign=Mar42018+Newsletter

https://www.sciencedaily.com/releases/2015/09/150903131728.htm

http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0144042

https://onlinelibrary.wiley.com/doi/full/10.1002/oby.20466

https://www.ncbi.nlm.nih.gov/pubmed/21419479

Increasing Leptin sensitivity can reduce body weight.

https://wellnessmama.com/5356/leptin-resistance/

https://medlicker.com/1038-foods-that-increase-leptin-sensitivity

https://universityhealthnews.com/daily/nutrition/how-to-increase-leptin-sensitivity-5-strategies-for-easier-fat-loss/

https://blog.bulletproof.com/how-to-reset-your-leptin-sensitivity-and-master-your-metabolism/

https://www.healthline.com/nutrition/leptin-101

Increasing insulin sensitivity will help with leptin levels.

https://www.marksdailyapple.com/25-ways-to-improve-your-insulin-sensitivity/

https://www.selfhacked.com/blog/top-tips-for-fixing-insulin-resistance/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3265866/

Ghrelin can also effect our weight and those who are obese seem to have lower levels of ghrelin but are more sensitive to it. They believe this is because many obese people have been shown to have high cortisol levels. This makes us more sensitive to ghrelin. Rooibos, suma and maca are adaptogenic herbs. Ghrelin, insulin and leptin communicate with each other so issues with those will effect our ghrelin levels.

https://www.healthline.com/nutrition/9-fixes-for-weight-hormones#section4

https://www.selfhacked.com/blog/ghrelin-role-cognitive-gut-function-weight-inflammation-autoimmunity/

https://draxe.com/ghrelin/

Things that effect ghrelin.

https://academic.oup.com/abbs/article/41/3/188/655

https://www.ncbi.nlm.nih.gov/pubmed/29632576

https://www.psychologytoday.com/us/blog/the-athletes-way/201607/vagus-nerve-stimulation-dramatically-reduces-inflammation

Ghrelin regulates our glucose levels in the body and many other things.

https://www.sciencedirect.com/science/article/pii/S2212877815000605

https://www.sciencedirect.com/science/article/pii/S0196978117303844

Often times weight loss can cause a rise in appetite because of the raised Leptin levels. Once leptin levels come down this resolves itself.

https://www.precisionnutrition.com/leptin-ghrelin-weight-loss

Also what contributes to obesity is the low nutrient food and they manipulate advertising to influence what we eat.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2743554/

Inflammation and high histamines can cause issues with our cannabinoid receptors and this can lead to diabetes and obesity.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3839256/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1087185/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4082307/

https://www.ncbi.nlm.nih.gov/pubmed/26374449

How stress impacts the body and contributes to obesity.

https://robbwolf.com/2012/04/26/diet-stress-biochemistry/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4843770/

Diet effects gut bacteria and can cause obesity and diabetes. Food additives are one of the biggest culprits contributing to obesity.

https://www.naturalnews.com/053257_gene_activation_human_development_food_influences.html

https://www.nature.com/articles/nature14232

https://academic.oup.com/jcem/article/101/1/233/2806797

https://www.prnewswire.com/news-releases/mango-and-the-microbiota-new-research-reveals-potential-role-of-this-superfruit-in-maintaining-gut-health-300323541.html

https://www.sciencedaily.com/releases/2015/02/150225132105.htm

https://www.cell.com/cell-reports/fulltext/S2211-1247(17)30751-9

https://drhyman.com/blog/2016/02/18/how-to-fix-your-gut-bacteria-and-lose-weight/#

https://biofoundations.org/increasing-and-maintaining-akkermansia-muciniphila-for-a-healthy-gut-microbiome/

Information about gut microbiome and what they do.

https://www.vitamodularis.org/articles/how_to_interpret_your_microbiome_data.shtml

Microbiota that cause weight loss and weight gain.

https://link.springer.com/article/10.1007%2Fs13167-017-0117-3

How to boost the good gut bacteria.

https://nutritionfacts.org/2013/01/10/boosting-gut-flora-without-probiotics/

Our gut bacteria determines our body type. Remember our gut bacteria modulate our genes and will determine if we are thin or obese based on what the composition of our microbiome is.

http://jlpm.amegroups.com/article/view/3715/4419

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4856456/

Vaccines and antibiotics contribute to obesity. Just like anything else obesity is actually an illness. Most who are obese are not obese because they are lazy. I know many obese people who were very hard workers.

https://www.bmj.com/content/345/bmj.e4824/rr/598722

http://www.najms.org/article.asp?issn=1947-2714;year=2016;volume=8;issue=7;spage=297;epage=306;aulast=Geier

https://www.hormonesmatter.com/obesity-childhood-vaccines-blame/

https://sharylattkisson.com/2014/05/14/research-immunologist-sees-vaccine-link-to-autism-obesity-diabetes-in-children/

So we have established obesity can be an autoimmune disorder but it can also be a metablolic disorder.

https://www.wageningenacademic.com/doi/abs/10.3920/BM2016.0184?url_ver=Z39.88-2003&rfr_id=ori%3Arid%3Acrossref.org&rfr_dat=cr_pub%3Dpubmed

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4239493/

Our diet can contribute to this.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4034518/

Antibiotics can cause many health problems including obesity and diabetes.

http://diabetes.diabetesjournals.org/content/57/6/1470

Our gut bacteria modulate our metabolism.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2925525/

https://www.scientificamerican.com/article/how-gut-bacteria-help-make-us-fat-and-thin/

The sad part is the drugs to counter act the health effects of the first drug causes even more severe health problems.

https://pubs.acs.org/doi/abs/10.1021/pr401230s

Good carbs and bad carbs. Many avoid carbs but our gut bacteria need them to keep us healthy.

https://www.healthline.com/nutrition/good-carbs-bad-carbs#section2

Camu Camu can help with that though. Camu Camu helps reduce stress and inflammation.

http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652013000100355

Rose hips helps with obesity.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5139088/

Eating GMOs causes weight gain by changing our gut bacteria and our metabolism.

https://www.naturalnews.com/045247_GMOs_weight_gain_obesity.html

https://janeshealthykitchen.com/avoid-these-foods-with-monsantos-glyphosate/

http://www.organic-systems.org/journal/92/abstracts/Swanson-et-al.html

https://www.semanticscholar.org/paper/Survey-Reports-Improved-Health-After-Avoiding-Foods-Smith/49b291e5fcfbf0efbfc1eea34a74e99c8cf6fb6e

GMOs, farm chemicals and drugs can effect bile flow which can lead to obesity.

https://www.hindawi.com/journals/jl/2012/754067/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5370400/

https://www.researchgate.net/publication/305318376_Glyphosate_pathways_to_modern_diseases_V_Amino_acid_analogue_of_glycine_in_diverse_proteins

http://jem.rupress.org/content/early/2018/01/12/jem.20171965.long

http://www.mdpi.com/1099-4300/15/4/1416

https://www.theunion.com/news/twi/glyphosate-roundup-and-its-link-to-celiac-disease-gluten-intolerance/

All the above mentioned kill our butyrate producing bacteria which keep us from gaining weight.

http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0117851

Most allergies are caused by farm chemicals in our foods, processed foods, BT Toxin in GMOs cause the body to react the same would your body would if it had food poisoning. This can lead to allergies. Antibiotics kill our good gut bacteria which can lead to allergies. This can result in obesity.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3318912/

Exposure to heavy metals can lead to obesity by causing inflammation and metabolic issues.

https://www.sciencedaily.com/releases/2016/03/160310155052.htm

Stress, chemicals especially chemicals like glyphosate and glufosinate found in our food can raise zonulin levels. Many medications can raise zonulin levels setting things into motion that can lead to many health problems and obesity.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5363162/

Lipocalin and obesity.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3320254/

Lipocalin oxidizes fat causing weight loss.

https://onlinelibrary.wiley.com/doi/full/10.1002/oby.20507

Our gut bacteria need iron tho thrive but the iron they fortify food with is the wrong type. Iron found in curly dock and burdock root will supply you with iron without causing toxicity unless you have certain liver diseases. If you have iron toxicity lactoferrin will restore iron homeostasis. Curcumine will reduce iron levels in the blood also but do not take it too long or you can become anemic.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5491036/

Luteolin helps with obesity.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4490655/

Good vagus nerve health protects from obesity.

https://www.ncbi.nlm.nih.gov/pubmed/25433161

Many of the food manufacturers know processed sugar , processed fructose is even worse and causes inflammation which leads to obesity but they blame the people and hide the fact they new that it has ill effects on our health. I have not included the research in this blog post but processed honey acts pretty much like processed sugar but raw honey does not. Sugars in fruits help fight illness and have health benefits showing that we need the cofactors along with the sugars.

https://well.blogs.nytimes.com/2015/08/09/coca-cola-funds-scientists-who-shift-blame-for-obesity-away-from-bad-diets/

https://academic.oup.com/ajcn/article/84/2/274/4881805

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5490579/

I have posted on oxidative stress. It can lead to many health problems including obesity.

https://academic.oup.com/biomedgerontology/advance-article-abstract/doi/10.1093/gerona/glx177/4371617?redirectedFrom=fulltext

Resveratrol found in grape seed extract helps reduce inflammation which is a cause of obesity.

https://www.hindawi.com/journals/omcl/2013/793525/

Sage helps with diabetes.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4003706/

Vitamin A helps with diabetes and obesity but it and Vitamin D have to be balanced.

https://mcb.asm.org/content/29/12/3286.full

Vitamin D deficiency causes obesity, those with darker complexion are more prone to vitamin D deficiency.

https://www.nature.com/articles/srep10411

Even gut bacteria can positively impact our health.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3852723/

A list of diet advice by Dr Axe.

https://draxe.com/category/diets-recipes/diets-nutrition-plans/

Diet effects our health by changing our gut bacteria.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5600934/

https://www.cell.com/cell/fulltext/S0092-8674(15)01481-6

https://www.scientificamerican.com/article/fiber-famished-gut-microbes-linked-to-poor-health1/

Smoking can cause weight gain.

http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0186708

Sulfur is needed by almost every cell in the body. A deficiency or issue with sulfation can cause obesity. I have posted on sulfation.

https://www.westonaprice.org/health-topics/abcs-of-nutrition/sulfur-deficiency/

BH4 is involved in energy metabolism. It is effected by high sulfite levels, inflammation , oxidative stress and nutrient deficiencies. This can lead to obesity. A person with BH4 or CBS issues will be sensitive to sulfur containing foods and drugs.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5414566/

Toxins found in our food can cause issues with G6PD especially glyphosate and glufonisate which can lead to obesity.

http://diabetes.diabetesjournals.org/content/55/11/2939

Houttyynia can help with obesity.

https://globalfoodbook.com/benefits-houttuynia-cordata-chameleon-plant

Dandelion helps with diabetes.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5635758/

The flavonoids found in the white part of citrus fruit helps with obesity.

https://academic.oup.com/advances/article/5/4/404/4568623

Part of the problem is we do not get enough saturated fat now days.

https://www.healthline.com/nutrition/grass-fed-butter-superfood-for-the-heart#section1

https://paleoleap.com/butyrate-anti-inflammatory-fat/

Beta Glucan found in oats, barley and mushrooms help with obesity.

https://www.jfda-online.com/article/S1021-9498(16)30122-3/fulltext

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5618555/

We know inflammation can cause diabetes. Endothelins can cause inflammation.

https://www.selfhacked.com/blog/endothelins/?utm_source=ActiveCampaign&utm_medium=email&utm_content=The+Latest+From+SelfHacked&utm_campaign=Jan282018+Newsletter

There are many herbals that will reduce obesity by reducing the things that cause obesity like inflammation, histamines and autoimmune issues or addressing the nutrient deficiencies that can lead to those things.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3755736/

Nrf2 activators help with diabetes.

https://www.ncbi.nlm.nih.gov/pubmed/26165427

https://www.ncbi.nlm.nih.gov/pubmed/25672622

Lactoferrin helps with obesity by reducing the gut bacteria that cause obesity.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3648868/

Spirulina helps with obesity but is high in sulfur for those dealing with sulfur issue they may not be able to use this one.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5274660/

Many spices have healing properties.

https://translational-medicine.biomedcentral.com/articles/10.1186/s12967-018-1381-2

The microbes that help heal the gut.

 

This is not medical advice I am posting this for informational and educational purposes.

Most with inflammatory bowel disease have too many bacteriodes which is caused by excess meat consumption, antibiotics, glyphosate, glufosinate and other farm chemicals. This results in nutrient deficiencies which lead to metabolic and gene problems. Before you can get your gut bacteria reestablished you have to address those health issues because our gut microbes communicate with and modulate our genes. These are the bacteria that was found to help restore intestinal health in those with inflammatory bowel disease or leaky gut. They also help those with autoimmune issues and chronic illness.

Studies have shown that by alternating probiotics and taking lower doses of them and taking a break from them to leave them balance out is more effective at establishing a balance of our gut bacteria.

Each of our triggers are different so it is important to keep a food diary on how various food effects you.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4021001/

Our gut bacteria modulate our genes. So an imbalance in them or a deficiency has effects on our genes,

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5915727/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5892391/

We need a diversity in our gut bacteria for them to stay established.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6107516/

A loss of short chain fatty acid and butyrate producing bacteria cause inflammatory bowel disease and constipation.

https://jcm.asm.org/content/52/2/398

Our diets influence out gut bacteria for example meat alkalizes the gut producing an environment that will permit the rise of certain bacteria that can lead to health problems. If we consume too much meat it can lead to inflammatory bowel diseases because it raises bacteroides levels and kills the bacteria that produce the good fats we need and the short chain fatty acids the body needs. High bacteroides levels can also lead to heart disease, diabetes, and even autoimmunity. Also a diet high in meat can increase the bacteria in our guts that cause inflammation.

Transfats and oils like vegetable oil and canola oil were found to raise bacteroides levels and decrease our good short chain fatty acid producing bacteria. Oils like olive oil, coconut oil and fish oil have been found to promote good gut bacteria.

Whey protein and the glycoproteins found in mushrooms have been found to reduce bacteroides and increase the good gut bacteria.

Lactose has been found to increase the good bacteria that helps produce butyrate and short chain fatty acids. This is why it is important to address lactose intolerance, it can be corrected.

Sugar increases Bifidobacterium, this could be bad for those who are over weight but good for those who are under weight and need to gain weight.

Prebiotics like resistant starch, oligosaccharides, fructosaccharides increase our short chain fatty acid producing bacteria. Short chain fatty acids are very important keeping us healthy. They have also been found to increase the microbes that protect and strengthen the health of our digestive system.

Polyphenols found in fruit especially berries, promote good bacteria while reducing the bad.

Artificial sweeteners especially aspartame has been shown to increase bacteroides to the point it could lead to irritable bowel syndrome.

https://www.hyperbiotics.com/blogs/recent-articles/89735302-your-diet-changes-your-microbiome-fast

https://translational-medicine.biomedcentral.com/articles/10.1186/s12967-017-1175-y

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4417592/

A list of foods that increase our good gut bacteria.

https://cfsremission.com/2017/08/24/food-to-increase-bifidobacteria-and-lactobacillus/

In order to establish our good bacteria we need FOMAPs I found introducing them very slowly worked best for me as my gut bacteria received the food they needed and increased I could increase my FODMAP intake. If we stay on a FODMAP diet too long it will make it difficult to reestablish our good bacteria. Adjust the diet to your body do not stick strictly to diet but base it on how your body responds. I used a paleo diet after the FODMAP but did not stick to either diet strictly but based them on how my body responded.

Click to access 93.full.pdf

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5830546/

paleo diet.

http://paleozonenutrition.com/2018/02/21/autoimmune-paleo-protocol-in-inflammatory-bowel-disease-clinical-study-shows-remission-in-73/

Akkermana Muciniphila It is found in the upper part of the intestines and helps regulate bile acid production. Bile acids help regulate our pancreatic enzymes so indirectly it also regulates our digestive enzymes. It is believe to restore the mucous membrane in the digestive system. Polyphenols from berries helps to feed it and increase it’s numbers. Oligosaccharides also increase A Muciniphila. It has been found to be low in those with obesity. A deficiency in A Muciniphila will cause a deficiency in short chain fatty acids and inhibited lipogenesis. A person deficient in A Muciniphila will develop insulin resistance and low glucose levels.

https://ubiome.com/blog/post/akkermansiamuciniphila/

http://www.mdpi.com/2076-2607/6/3/75

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5614963/

Oligosaccharides and inulan have been shown to increase A. Muciniphila. This is why green algae and seaweed have so many health benefits they are high in oligosaccharides.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5983298/

https://www.sciencedirect.com/science/article/pii/S1756464617301627

https://gut.bmj.com/content/67/2/271.long

Roseburia species help produce butyric acid, short chain fatty acid and protects us from diabetes and obesity. They help prevent inflammatory bowel disease. Beta Glucan in mushrooms and oats , chitan and inulin help raise Roseburia levels. Butyric acid protects the gut and our brains. It also protects our nerves and is important in the absorption of nutrient. If we are deficient in butyrate we will not absorb nutrients. Butter and ghee are good sources of butyrate until the gut bacteria are restored.

https://www.futuremedicine.com/doi/abs/10.2217/fmb-2016-0130?src=recsys&journalCode=fmb

https://gut.bmj.com/content/63/8/1275.long

https://academic.oup.com/femsec/article/87/1/30/508741

Faecalibacterium Prautsnitzii increases IL-10, this is important because Lyme and other illnesses that carry the OspA protein inhibit IL-10 to stealth themselves from the bodies immune defense. There isn’t much known about it except that it is low in many types of digestive disorders. We get it from being around others who have it.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5705805/

https://www.nature.com/articles/ismej2016176

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5492426/

Clostridium Butyricum is a butyrate producing bacteria . Clostridum butyricum kills it’s cousin that cause negative health effects. It also increases IL-10 . It also decreases inflammatory cytokines. There are studies that have shown if the other healthy gut bacteria are not present this one like many of the bacteria species used in probiotics could start causing health problems.

https://www.ncbi.nlm.nih.gov/pubmed/30159141

https://www.ncbi.nlm.nih.gov/pubmed/30141701

https://www.ncbi.nlm.nih.gov/pubmed/29851202

It promotes better bowel movements.

https://www.ncbi.nlm.nih.gov/pubmed/30058712

https://academic.oup.com/cid/article/61/7/1107/289593

E Coli Nissle 1977 doesn’t only protect us from it’s cousins that cause ill health effects it also protects against other types of infections. It has been shown to put inflammatory bowel disorders into remission. It has too many benefits to mention. The only way I know of getting this one is through a probiotic called Multaflor.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5987069/

https://www.tandfonline.com/doi/full/10.3109/08910600903444267

E Coli Nissle 1977’s cousin can cause many health problems if not kept in check.

https://www.physiology.org/doi/10.1152/ajpgi.00091.2016

Lactobacillus Casei and L. Longum have been find to be deficient in many types of digestive disorders. They do not establish well of one or the other is missing it is best if they are taken together if you use a probiotic. The improve the bodies antioxidant capacity. We need SOD to produce H2O2 which the body uses to detox cells and transport nutrients and enzyme into and out of the cells. When deficient in these cellular macrophagy is inhibited. This help protect against cancer and other illnesses.

If we are deficient in them we can develop liver disease, lysosomal storage disorders and glycogen storage issues, insulin resistance and lose the ability to absorb nutrients. Our blood sugar levels will become low because insulin levels will increase. Bifidobacterium Bifidum has many of the same benefits and probably would benefit from taking it along with these. Also we cannot absorb proteins without the Lactobacillus strains.

https://www.hindawi.com/journals/omcl/2016/1340903/

https://www.ncbi.nlm.nih.gov/pubmed/30158369

They also help protect us from mold toxins.

https://www.frontiersin.org/articles/10.3389/fmicb.2018.01503/full

http://pubs.rsc.org/en/Content/ArticleLanding/2018/FO/C8FO00252E#!divAbstract

Lactobacillus Longum also produces folate for us.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4654071/

protects our lungs.

https://www.ncbi.nlm.nih.gov/pubmed/30020533

https://www.ncbi.nlm.nih.gov/pubmed/24830455

Insulin and glycogen issues.

http://www.ijpvmjournal.net/article.asp?issn=2008-7802;year=2016;volume=7;issue=1;spage=102;epage=102;aulast=Sharma;type=3

Protein absorption.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4741550/

A species of bacteria called lactobacillus casei shiroto is important in regulating our tryptophan levels. A deficiency in this strain will cause reduce tryptophan levels resulting in anxiety and the inability to sleep. A deficiency in this one can result in phenylketonuria which causes high ammonia levels in the body. A person who has this issues will get ill when they eat meat , potatoes or other things high in phenylalanine. Low levels of tryptophan can cause a loss of the beneficial bacteria in the Roseburia family which can lead to leaky gut and inflammatory bowel disease and sever constipation.

https://aem.asm.org/content/82/12/3649

https://www.researchgate.net/publication/287309677_Lactobacillus_casei_Shirota_modulation_of_ammonia_metabolism_in_physical_exercise

Fermented milk like butter milk and kefir help them get established.

https://www.jstage.jst.go.jp/article/fstr/10/2/10_2_143/_article

Many have been found to be deficient in Streptococcus Salivarius protects us from lung, oral and nasal infections. It also protects us from inflammation. Those who are deficient in S Salivarius will be prone to infection especially from it’s cousins in the streptococcus family that cause negative health effects. The only way I know to safely increase this is with lozenges that contain it because too much can cause health problems so you would want to avoid taking capsules of this.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3911234/

https://www.futuremedicine.com/doi/abs/10.2217/fmb.12.113?rfr_dat=cr_pub%3Dpubmed&url_ver=Z39.88-2003&rfr_id=ori%3Arid%3Acrossref.org&journalCode=fmb

https://www.nature.com/articles/s41598-017-11446-z

Lactobacillus Rhamnosus helps prevent diarrhea , has been shown to reduce symptoms of inflammatory bowel disease. It helps protect us from infection. Helps protect us from allergies,obesity and diabetes. It also helps protect us from staph infection.

H Pylori is commensal but without Lactobacillus Rhamnosus to keep it in check it can cause gastric ulcers.

https://www.selfhacked.com/blog/l-rhamnosus/

https://aem.asm.org/content/80/18/5773

https://www.frontiersin.org/articles/10.3389/fmicb.2018.01873/full

We also need fungus for example Saccharomyces Cerevisiae know as brewers yeast helps prevent diabetes. They used to think S Boulardii was a separate species but it has been found to be the same. I couldn’t afford the supplement so I bout a package of brewers yeast and consumed it. Wasn’t sure it would make it through my stomach acid but I felt improvement so I believe it does. Now this is one you do not want to increase too much, also you do not want to take this if you have autoimmune issues or leaky gut. It can act as a pathogen if it gets into the blood stream, many of our microbiome can if they get too high in numbers or get into our blood stream.

https://www.ncbi.nlm.nih.gov/pubmed/23967428

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4705302/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5605952/

S Cerevisaiae helps reduce vaginalis and candida.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6037478/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5354225/

https://onlinelibrary.wiley.com/doi/full/10.1111/j.1574-6968.2010.02037.x

Lactobacillus Rueteri produces folate those who have folate deficiency have been found to be low in folate and have high inflammation levels. L Rueteri also regulates our oxytocin which can give us a feeling of self worth and well being. A deficiency in L Rueteri can lead to extreme depression.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5061717/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5431580/

Our gut bacteria produce B vitamins for each other and maintain each other. If the ones who produce the B vitamins are missing then the microbiome will get them from our foods which will prevent us from receiving them. This is why it is important to eat foods high in B vitamins and to protect our gut bacteria from antibiotic, farm chemicals and toxins in our foods like artificial sweeteners.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4403557/

Lactobacillus Acidophilus prevents diarrhea, helps protect against clostridium infections. Those with interstitial cystitis are usually deficient in this one. It helps reduce symptoms of inflammatory bowel disorder. Acidophilus regulates our ph of our digestive system and bladder and keeps it at the correct ph. Our bladders and digestive system need to be acidic. An akaline environment can cause a loss of our good gut bacteria and promote the growth of the bad. It can also cause candida to go from commensal to a pathogenic form. Many with interstitial cystitis have found relief using L Acidophilus suppositories. Those who are having difficulty gaining weight usually have excess L acidophilus levels because it speeds up metabolism and those who have problems with weight gain are often deficient in acidophilus. Fermented foods are high in this but those with high histamine must reduce their histamine before eating fermented food I addressed that in my autoimmune post.

https://www.healthline.com/nutrition/lactobacillus-acidophilus#section3

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2705118/

Bifidobacterium increased the acid levels of our digestive tract which inhibits bad bacteria from growing and help keep our digestive tract acidic. It has been shown to reduce symptoms of irritable bowel disease.

https://www.nature.com/articles/ajg200925

Bifidobacterium Infantis protects us from autoimmune disorders by regulating our T cells. B infantis also helps protect our digestive tract.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4277968/

https://www.ncbi.nlm.nih.gov/pubmed/28230606

This is an in depth discussion of probiotics.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3424311/

more information on microbiome and folate production.

http://www.mdpi.com/2072-6643/3/1/118

Bifidobacterium Breve reduces symptoms of celiac disease.

https://www.ncbi.nlm.nih.gov/pubmed/26134988

Frequent constipation is a sign of a deficiency in the bifidobacterium species.

https://www.ncbi.nlm.nih.gov/pubmed/28884754

If we are deficient in the lactobacillus species we are more prone to salmonella infection.

https://www.ncbi.nlm.nih.gov/pubmed/29120368

https://www.ncbi.nlm.nih.gov/pubmed/28975642

Lactobacillus Bulgaris increases T Regulatory cells which prevents on over active immune response.

https://www.thieme-connect.com/DOI/DOI?10.1055/s-0043-117612

Too many Lactobacillus Delbrueckii can cause urinary tract infection.

https://jcm.asm.org/content/47/1/275

Our gut microbiome produce many of our nutrients so a deficiency in a specific strain can cause nutrient deficiencies especially in the B vitamins.

https://microbialcellfactories.biomedcentral.com/articles/10.1186/s12934-017-0691-z

Quinones like PQQ is needed by our gut bacteria to thrive and balance out. They convert it to vitamin K2.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738691/

Phylloquinone (vitamin K) is also used by our gut bacteria and converted to vitamin K2. Animal products and leafy green vegetables are good sources of vitamin K . Many should be cooked especially spinach and kale because they are very high in oxalates.

http://www.jbc.org/content/283/17/11270.full

https://www.medicalnewstoday.com/articles/219867.php

https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/phylloquinone-vitamin-k1-intakes-and-food-sources-in-1864-year-old-irish-adults/00B5ECF7B563D1A3ADAA94986FC83223

Some food sources of quinones are. Natto, Green Tea, Parsley, Paypaya and green peppers. Some may benefit from supplementing PQQ because many of the foods that contain it are very high oxalate like kiwi.

https://biofoundations.org/dietary-sources-of-pyrroloquinolone-quinone-pqq/

https://optinghealth.com/foods-high-in-pqq/

Soil based probiotics have been shown to improve digestive health.

Bacillus Subtilis produces and antibiotic that protects us but is none toxic to the good bacteria. B Subtilis has antioxidant properties. B Subtilis has been shown to restore normal gut flora. B Subtilis has been shown to relieve constipation and diarrhea. It has reduce symptoms of inflammatory bowel disease. It boost immunity and fights H Pylori. It improves the health of the liver. It promotes the production of digestive enzymes which improves gut health.

https://www.ncbi.nlm.nih.gov/pubmed/21204933

https://www.selfhacked.com/blog/b-subtilis/

https://www.globalhealingcenter.com/natural-health/bacillus-subtilis-probiotic-strain/

Bacillus Coagulans improves insulan sensitivity. High insulin levels are common in inflammatory bowel disease, this would help reduce insulin levels. It helps reduce diabetes symptoms. B Coagulans improves muscle recovery and prevent arthritis. It helps increase the beneficial microbes in the gut. It relieves intestinal pain inflammation and constipation. B coagulans reduces the risk of urinary tract infections.

https://www.selfhacked.com/blog/b-coagulans/

https://www.verywellhealth.com/bacillus-coagulans-for-better-bowel-health-89601

Bacillus Clausii protects us from respiratory infection. It fights the infections that cause diarrhea. It reduces symptoms of inflammatory bowel disease.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1936284/

https://www.omicsonline.org/open-access/bacillus-clausii–the-probiotic-of-choice-in-the-treatment-of-diarrhoea-2157-7595-1000211.php?aid=63792

Two soil based probiotics to watch out for because they can cause major health problems are bacillus Licheniforms and Enteroccocus Faecium.

Those with inflammatory bowel disorders have high bacteroides. They produce high levels of Beta Glucuronidase. This inhibits glucuronidation which is needed to detox mold toxins.

What is Beta-glucuronidase?

Click to access vol6232013319.pdf

Germ Theory and Terrain Theory are wrong.

Terrain theory is wrong and so is germ theory. I will add more links showing this is true as I find them. Our group on Facebook Synergistic Illness has come up with a theory we call “Enviromental Biome Theory of Health. ” . Our environment as a whole effects our health and if you read my post on here on “It is not your genes it is your gut bacteria” or “Vaccines spread disease they do not prevent them” and many other of my post support this theory. The health of our soil is important because if it is healthy then the plants are healthy providing more nutrients. If there are chemicals and toxins in the soil they effect the body and cause us to be susceptible to things making us ill that would normally be beneficial. I covered that in my post
“Things Science has wrong”.

It is our internal and external exposome that determines if we get ill or not. This is why some seem immune to infectious disease while others seem impervious. Medications, toxins in our foods, chemicals used for farming are destroying the external and internal exposome. Studies have shown many supposed infectious agents can play a protective roll in the body so we need to ask ourselves why in some do these supposed infectious agents protect them but make others ill?

In this post i am showing how our gut microbiome regulate our gene expressions and our immune system. They also are responsible for all types of immunity in the body. I posted the links to the other blog post that support this at the bottom of this post.

Bifidobacterium feed each other.

If we was all like Bifidobacterium the world would be a better place.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4623478/

How our bodies feed our bacteria.

https://www.frontiersin.org/articles/10.3389/fmicb.2017.00484/full

Inflammation causes a loss of pattern recognitions sensor which is how HIV and cancer become established.

https://www.frontiersin.org/articles/10.3389/fimmu.2014.00367/full

Inflammation can also lead to NAFLD.

http://stke.sciencemag.org/content/sigtrans/10/491/eaal3336.full.pdf

Ketogenic diet restores gut balance.

https://www.nature.com/articles/s41598-018-25190-5/

Importance of being eubiotic

https://www.omicsonline.org/open-access/the-importance-of-being-eubiotic-2329-8901-1000162.php?aid=88559

how our gut bacteria regulate our gene expressions. Too many of some and not enough of others can lead to cancer, autoimmunity, even COPD.

https://www.nature.com/articles/cmi20187

http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.1019.4532&rep=rep1&type=pdf

http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005579

https://gutpathogens.biomedcentral.com/articles/10.1186/1757-4749-5-23

Irritable bowel syncrome.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5525272/

Our gut microbiome regulate whether we get cancer or not.

https://msystems.asm.org/content/3/3/e00205-17

Our gut bacteria effect whether we are obese and whether we develop heart disease.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6063892/

Metabolic issues and autoimmune issues need to be addressed or our genes cannot communicate with our gut bacteria this can lead to diabetes.

http://jem.rupress.org/content/early/2016/09/07/jem.20160526

Our genes communicate with our gut microbiome.

http://jem.rupress.org/content/215/8/1965.long

http://cancerres.aacrjournals.org/content/77/8/1783

Our gut microbiome prevent bone loss through the production of SCFA.

https://www.nature.com/articles/s41467-017-02490-4

Our gut bacteria regulate our T cells and B cells.

https://www.tandfonline.com/doi/full/10.1080/19490976.2017.1299311

https://febs.onlinelibrary.wiley.com/doi/full/10.1016/j.febslet.2014.04.007

T cells turn genes on and off making us susceptible to illness if there is an imbalance.

https://www.nature.com/articles/ncomms4551

When you read the following studies you will see the connection with this one and how our gut help develop humoral immunity.

https://www.ncbi.nlm.nih.gov/pubmed/27760339

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4916850/

Our microbiome regulate our T cells so it is a microbiome cycle of communication.

http://www.pnas.org/content/114/21/5497.long

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6080902/

IgA is needed for our gut microbiome to become established.

https://authors.library.caltech.edu/85463/

http://science.sciencemag.org/content/360/6390/795.long

Now if you read this study you will see that our gut microbiome regulate our immune system. It is a cycle so we need diversity. Now there are many things that can disrupt this cycle. T cells are needed to keep this cycle going and there are many things that can cause a T cell imbalance.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4451207/

Certain strains of bacteria can restore IgA production.

https://www.nature.com/articles/s41598-018-23404-4

Our diet effects our gut bacteria.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5787545/

Resveratrol helps restore MyD88 function.

https://www.ncbi.nlm.nih.gov/pubmed/30107238

MyD88 is needed to fight pathogens. It causes an immune response by causing inflammation.

http://www.jbc.org/content/280/32/29242.full

The Nrf2 pathway is needed to prevent excess inflammation from MyD88 activation. Blocked Nrf2 will cause excess inflammation.

https://www.sciencedirect.com/science/article/pii/S0006291X10021108

https://www.cell.com/cell-reports/abstract/S2211-1247(15)00802-5

IL-10 prevents MyD88 from causing exciess inflammation.

http://www.pnas.org/content/106/43/18327.full

Along with our T cells and B cells our gut bacteria also regulate IL-10.

https://www.hindawi.com/journals/jir/2014/586939/

Issue with the retinoic receptor can also inhibit our gut bacterias communication with our cells.

https://www.nature.com/articles/mi2016114

It is important for that communication to keep our body from attacking our good gut bacteria.

https://www.nature.com/articles/nature10434

Those who have an over active immune response would want to avoid TLR2 agonist they increase the immune response and the inflammation. This would help those who have low CD4 counts.

http://www.jimmunol.org/content/jimmunol/186/2/1119.full.pdf

Coriolus mushroom is a TLR2 agonist which would stimulate the immune system.

https://www.ncbi.nlm.nih.gov/pubmed/21068144

Turkey tail mushroom also is a tlr2 agonist.

http://dl.begellhouse.com/journals/708ae68d64b17c52,5c93eb0962bab6ac,34fa1edb20739135.html

Spirulina increases cd4 T cells.

http://www.mdpi.com/2072-6643/6/7/2973

Those with HIV lack the gut bacteria that stimulate CD4 cell production.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4891875/

These are things that help with HIV.

http://www.greenmedinfo.com/blog/38-natural-alternatives-hiv

Yogurt increases CD4.

https://insights.ovid.com/pubmed?pmid=20463586

Phloretin is a TLR2 inhibitor. This reduces the immune response and would reduce inflammation.

http://www.mdpi.com/2072-6643/10/7/868

Biacalein is a tlr2 inhibitor.

https://www.hindawi.com/journals/bmri/2012/267890/

We need to keep in mind that our immune system protects us from cancer so loss of MyD88 can lead to cancer.

https://www.sciencedirect.com/science/article/pii/S0304383518304440

Inhibiting mTOR restores MyD88 this would help with inflammation and HIV.

http://www.jimmunol.org/content/187/11/6052

MyD88 is needed to fight infection but if it is over stimulated it can cause health problems.

http://www.pnas.org/content/111/10/3799.full

So what could cause these cytokine storms that will not shut down. Well vaccines have been well documented for causing such reactions.

https://www.researchgate.net/publication/7105965_The_TLR4_agonist_monophosphoryl_lipid_A_attenuates_the_cytokine_storm_associated_with_respiratory_syncytial_virus_vaccine-enhanced_disease

Over active MyD88 can lead to cancer, lupus and other autoimmune diseases , in autoimmunity TLR are up-regulated which activates MyD88 causing a cytokine storm. If you look at the studies below then look at documented vaccine injury cases you will see they are connected.

http://jem.rupress.org/content/212/13/2184

http://www.pnas.org/content/110/35/E3311.long

https://link.springer.com/article/10.1007%2Fs12016-013-8402-y

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4708030/

http://www.bloodjournal.org/content/101/9/3495?sso-checked=true

The harmfull effects of pesticides and herbicides to the gut have been well documented.

http://www.mdpi.com/1099-4300/15/4/1416

https://www.sciencedirect.com/science/article/pii/S0041008X13000549

this is a good article explaining how toxins effect our gut. I have posted on things that effect the gut bacteria. Now we know that they regulate our immune system and many of our genes anything that effects our gut bacteria including dyregulation in B cells or T cells causes a loss of communication with our gut bacteria leading to chronic illness.

https://iamajuicer.wordpress.com/2018/07/16/modern-medicine-is-not-based-on-science/

https://iamajuicer.wordpress.com/2018/07/19/synergistic-illness/

https://iamajuicer.wordpress.com/2018/06/27/its-not-your-genes-it-is-your-gut-microbiome/

https://iamajuicer.wordpress.com/2018/06/17/vaccinations-spread-and-cause-disease/

https://iamajuicer.wordpress.com/2018/07/23/how-toxic-is-your-food/

It’s not your genes it is your gut microbiome.

This is not medical advice and should not be taken as such. I am posting this for educational and informational reasons.

 

This is a list of gut microbiota and the conditions they help with.

Probiotic Guide.

I state this often to people. You should not take the same strains of probiotic everyday. It will lead to SIBO which causes major health problems. You have to alternate the strains you take and take a break from probiotics once in a while to let the microbiome balance out. Sibo can lead to metabolic acidosis and many other health problems.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6006167/

http://www.beyondmthfr.com/category/home-slider/

Your gut bacteria not your genes is what makes you predisposed to illness. I am going to cover some candida myths at the end of this.

https://www.nature.com/articles/s41467-017-02651-5

http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0154387

Before you read this you need to understand many scientist fabricate and falsify research. Much of what we believe is not true if you start questioning things you will start seeing through the smoke screens. Many things that have been proven wrong they teach as if they are fact. Germ theory is one of them it has been proven wrong many times.

http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0005738

https://www.naturalnews.com/022332_disease_medicine_germs.html

https://joedubs.com/the-fallacious-germ-theory/

People do not take it lightly when their perception of the reality of things has been challenged. They have killed people for exposing the truth behind fake science and for publishing true science. We also have the corruption in this political system involved.

http://www.annclinlabsci.org/content/37/3/295.full

https://sciencebasedmedicine.org/persecution-of-scientists-whose-findings-are-perceived-as-politically-incorrect/

Our gut bacteria tell us what to eat.

https://www.scientificamerican.com/article/how-gut-bacteria-tell-their-hosts-what-to-eat/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5987188/

Ok now for the information. One mistake people make if their histamine levels go up when they take a probiotic they panic. When you first take a probiotic it sends out a molecule to tell your body to produce histamines. That makes the mucous membrane more porous. It does this so it can enter and establish itself in the mucous membrane. Once it is in and has set up camp it will continually send out a molecule telling the body not to produce too many histamines so it does not kill the good gut bacteria. So initially histamines will rise for a day or two then after they are established they will drop back down. You may bloat when you first take probiotics. It is best to alternate the types you take or you will develop gut dysbiosis. That is as bad if not worse then having Candida. Your gut bacteria keep your bladder and digestive system acidic. If it becomes alkaline which is usually caused by high ammonia levels in the body. High ammonia levels can be a result of inhibited sulfation or having too many sulfur digesting, methane producing bacteria. High ammonia levels can also be the result of high endotoxin or afloxin levels. I experienced Candida and dysbiosis . I found grapefruit seed extract helped a lot. But you can only take it for a few days and you cannot take it more then two days a week because it inhibits cytochrome P450 enzymes. Yogurt , fermented foods and aged meets should be avoided they have histamine producing bacteria in them and will raise histamine and inflammation levels. Once you get things straightened out you can eat those. I take 3 days a week where I do not take any probiotics to prevent dysbiosis. Some Probiotics that reduce histamines.

Bifidobacterium Infintus

Lactobacillus Rhamnosus

Lactobacillus Salivarius

Lactobacillus Sporogenes

Lactobacillus Saccharomyces

Lactobacillus Bouldardii

Lactobacillus Acidophilus

https://kresserinstitute.com/gut-flora-food-allergies-connection/

https://www.drbenlynch.com/histamine-intolerance-probiotics/

https://medium.com/the-mission/3-tips-for-a-healthy-gut-biome-hint-yogurt-is-not-one-of-them-fd302f43143

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5537787/

These bacteria are needed by the body but should be avoided if you have high histamines.

Lactobicilli Casie

Lactobicillus Reuteri

Lactobacillus Plantarum

https://bodyecology.com/articles/do-you-have-histamine-intolerance-4-steps-to-rebuild-tolerance

This is a good article on probiotics and histamines.

https://wholenewmom.com/health-concerns/low-histamine-probiotics

An imbalance of gut microbiome can result in allergies.

http://m.pnas.org/content/111/36/13145.abstract

This is another good article on lowering histamines it mentions s few strains of probiotics.

http://www.low-histamine.com/tag/probiotics

High Substance P levels can make our skin peel and cause gut issues. One of the major causes of high substance P is stress. Probiotics that reduce stress reduces substance P. High substance P causes burning skin , it will get worse at night. The worst burning will be in the scalp and down the spine. Because high substance P can make the skin itch it gets mistaken for high histamine.

http://mentalhealthdaily.com/2016/03/01/10-best-probiotics-for-depression-anxiety-gut-brain-axis-modification

This is a very informative article on probiotics.

http://drjockers.com/is-the-gut-brain-skin-axis-to-blame-for-anxiety-and-acne

Good information on choosing probiotics.

http://onlinelibrary.wiley.com/doi/10.1111/j.1574-695X.2005.00026.x/full

Antibiotics and farm chemicals kill this and it protects and heals our gut.

https://biofoundations.org/increasing-and-maintaining-akkermansia-muciniphila-for-a-healthy-gut-microbiome/

https://www.nature.com/articles/nmicrobiol201521

H Pylori prevents allergies and asthma.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3888205/

You can balance your gut bacteria but it takes time and persistence.

http://drhyman.com/blog/2016/02/18/how-to-fix-your-gut-bacteria-and-lose-weight/

https://www.biose.com/en/intestinal-microbiota/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4156804/

https://www.healyounaturally.com/9-things-you-never-knew-probiotics-could-do-to-improve-your-health/

If you bloat from taking a probiotic it could be you are taking too many or too often, or it could be die off of a pathogen.

https://www.probioticscenter.org/bloating-and-probiotics/

Information on selecting probiotic strains.

https://onlinelibrary.wiley.com/doi/full/10.1111/j.1574-695X.2005.00026.x

http://www.mnwelldir.org/docs/terrain/gut_bacteria.htm

This is a link to the human microbiome project. You can find many studies on the gut bacteria here.

https://commonfund.nih.gov/publications?pid=16

https://depts.washington.edu/ceeh/downloads/FF_Microbiome.pdf

It is very important to balance our gut bacteria they regulate gene expressions. They are involved with methylation and metabolic pathways. A disruption in them cause problems throughout our bodies. Supposed inherited imperfection are really a lack of certain commensal microbiota. Much of what they claim is genetic can be corrected by getting the correct microbiota.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3518434/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4267719/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5748575/

https://academic.oup.com/nutritionreviews/article-abstract/75/5/374/3752374?redirectedFrom=fulltext

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5892391/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5448084/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5448088/

Obesity

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4271550/

https://www.ncbi.nlm.nih.gov/pubmed/29142285

https://www.ncbi.nlm.nih.gov/pubmed/28249045

https://www.nature.com/articles/srep08731?error=cookies_not_supported&code=bfc3c947-3825-4a3c-b1d4-18749d295614

Our gut bacteria is important for bone health.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4887186/

Many diseases can be link to our gut bacteria.

https://nyaspubs.onlinelibrary.wiley.com/doi/full/10.1111/nyas.13416

Inflammation

https://www.ncbi.nlm.nih.gov/pubmed/24533976

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3744517/

Diabetes.

https://www.ncbi.nlm.nih.gov/pubmed/24533976

https://www.ncbi.nlm.nih.gov/pubmed/24325907

The microbiome in our guts is what causes chronic illness.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5339702/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4500982/

Our emotions

https://www.ncbi.nlm.nih.gov/pubmed/28533660

https://www.ncbi.nlm.nih.gov/pubmed/28164854

https://www.ncbi.nlm.nih.gov/pubmed/27924137

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3179073/

https://www.cell.com/trends/neurosciences/fulltext/S0166-2236(13)00008-8

Correcting autism

http://www.healourlittleones.com/?p=837

https://www.cell.com/cell/fulltext/S0092-8674(16)30730-9

Our gut bacteria regulate our circadian rhythm.

https://kresserinstitute.com/gut-circadian-rhythm-connection/

The list of things modulate by our gut bacteria goes on and on.

Our gut bacteria regulate our immune system especially in our lungs. We have a gut lung axis.

https://www.ncbi.nlm.nih.gov/pubmed/21412185

https://www.sciencedaily.com/releases/2010/06/100614171907.htm

http://pediatrics.aappublications.org/content/121/Supplement_2/S115.2

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5397731/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3337124/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5902499/

https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-0921-4

https://www.nature.com/news/the-nose-knows-how-to-kill-mrsa-1.20339

https://www.sciencedirect.com/science/article/pii/S0300908411001441?via%3Dihub

Our gut bacteria train our immune system to impart immunity.

https://www.ncbi.nlm.nih.gov/pubmed/29338074

https://www.ncbi.nlm.nih.gov/pubmed/18990206

https://www.ncbi.nlm.nih.gov/pubmed/29142211

http://www.jimmunol.org/content/198/2/572

Many in science still have not come to realized this. They believe that B Cells and T cells are involved in our developing immunity even though this has been proven false many times.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3359130/

Breast feeding is also important because the mother imparts immunity to the child this way.

https://www.ncbi.nlm.nih.gov/pubmed/12850343

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4902239/

If a child does not get a variety of bacteria early in life they will become prone to chronic illness.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4674690/

Our gut bacteria protect us from pathogens. We have commensal bacteria related to the pathogens. The commensal protect us from their cousins. Many are lacking E Coli Nissle 1917. Also bacteria in our nasal cavities and other areas of the body.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5572226/

http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0107758

http://iai.asm.org/content/77/7/2876.full

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4988121/

They protect us from urinary tract infection.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2684288/

Our gut bacteria protect us from inflammation

https://www.ncbi.nlm.nih.gov/pubmed/29532517

Our metabolic issues can effect our gut bacteria.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4083503/

http://mbio.asm.org/content/5/6/e01817-14.short

Your gut bacteria regulate your body mass.

https://www.cell.com/cell/fulltext/S0092-8674(14)01241-0

http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0117851

Infants get their microbiome from their mother and environment.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3751348/

https://www.youtube.com/watch?v=ElI5q0BWKv0

The western diet has caused many species of bacteria we need to keep us healthy. With the antibiotics, and farm chemicals many species of bacteria that preserve our health is now extinct in the US.

https://www.nature.com/articles/nature16504?foxtrotcallback=true

https://www.nature.com/articles/nature14232

https://www.ncbi.nlm.nih.gov/pubmed/27812084

There is even evidence that our bodies and gut bacteria are meant to eat a seasonal diet.

https://www.newscientist.com/article/2145275-eat-a-seasonal-diet-and-your-gut-microbes-may-change-in-sync/

This is a review of the effects of synbiotics, probiotics and prebiotics.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5622781/

Our gut bacteria determine if we are happy and mentally healthy.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5040025/

https://www.ncbi.nlm.nih.gov/pubmed?term=Cell[Jour]+AND+2013[pdat]+AND+Hsiao[author]&cmd=detailssearch

https://academic.oup.com/emph/article/2015/1/106/1796013

Strokes have been tied to our gut bacteria.

https://www.nature.com/articles/nature22075

Autism has been linked to our guts.

https://www.bcm.edu/news/pathology-and-immunology/study-connection-between-antibiotics-austism

http://theautismintensive.com/interviews/james-adams-phd/

Mental illness has been linked to our guts.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4879184/

https://www.ncbi.nlm.nih.gov/pubmed/29930222

https://www.ncbi.nlm.nih.gov/pubmed/18283240

Liver disease is from inherited gut bacteria.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5622747/

https://aasldpubs.onlinelibrary.wiley.com/doi/full/10.1002/hep.25704

https://www.ncbi.nlm.nih.gov/pubmed/23873346

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5780381/

When born by C section the infant does not get the beneficial bacteria.

https://www.nature.com/articles/nm.4039

Many toxins in our foods especially BT Toxin, glyphosate and glufonisate can inhibit FUT2. This is an enzyme that we secrete that keeps our gut bacteria healthy. Medications like fluoroquinolones can slo inhibit it along with endotoxins from pathogens and afloxin from fungus. This causes food intolerances, food allergies and chronic illness from gut dysbiosis which produces high sulfite and hydroxy radicals which raise ammonia levels in the bladder and digestive system. Ammonia alkalizes our bladder and digestive system. It should be acidic to prevent pathogens. Candida and H Pylori are normally commensal but when we become alkaline they become pathogenic. Also many pathogens prefer an alkaline enviroment. This also leads to gluten, milk and protein intolerance.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3800993/

https://experiencelife.com/article/get-smart-about-antibiotics/

https://detoxproject.org/glyphosate/glyphosate-and-roundup-negatively-affect-gut-bacteria/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3945755/

https://realfoodforager.com/glyphosate-an-assault-on-your-microbiome/

https://www.nature.com/articles/ismej20073

https://link.springer.com/article/10.1007/s00284-012-0277-2

https://genomemedicine.biomedcentral.com/articles/10.1186/s13073-016-0294-z

http://www.discoverymedicine.com/Paul-D-Cotter/2012/03/15/the-impact-of-antibiotics-on-the-gut-microbiota-as-revealed-by-high-throughput-dna-sequencing/

http://www.anh-usa.org/genetically-engineered-food-alters-our-digestive-systems/

Antibiotics and farm chemicals are causing more virulant pathogens.

http://mbio.asm.org/content/6/2/e00009-15

Not only that but there is the possibility of the transgenes of the GMOs transferring to our gut bacteria making them into a pesticide factory.

http://responsibletechnology.org/gmo-education/section5/

Oligosaccharides help when someone is not producing FUT2 enzymes.

http://www.newhope.com/ingredients/oligosaccharides-revealing-more-health-benefits

https://nutritionfacts.org/2013/01/10/boosting-gut-flora-without-probiotics/

If we get the correct nutrients our gut bacteria will produce non toxic antibiotics for us.

https://www.jyi.org/2017-march/2017/5/1/addition-of-zinc-manganese-and-iron-to-growth-media-triggers-antibiotic-production-in-bacterial-isolates-from-the-lower-atmosphere

https://www.scientificamerican.com/article/fiber-famished-gut-microbes-linked-to-poor-health1/

Our gut bacteria protect each other and secrete and enzyme that protects them from Reactive Oxygen Species. When the above mentioned causes a loss of those bacteria then the other gut bacteria is defenseless and also dies.

http://europepmc.org/articles/PMC4567566

Toxins also damage our tight junction layer in our guts letting food particles enter our blood stream along with toxins that would usually be inhibited by the tight junction protein layer.

https://www.youtube.com/watch?t=2033&v=Ea-VzpdKwrc

E Coli Nissle 1917 regulates our tight junction protein layer. E Coli

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5156689/

https://onlinelibrary.wiley.com/doi/full/10.1111/j.1462-5822.2006.00836.x

Our gut bacteria protect us from oxalates. If they get high we become prone to kidney stones and chronic illness.

https://www.ncbi.nlm.nih.gov/pubmed/20602988

https://www.ncbi.nlm.nih.gov/pubmed/20224931

https://www.hindawi.com/journals/bmri/2013/280432/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5300857/

https://www.sciencedirect.com/science/article/pii/B9780323527255000174

When H Pylori is commensal it prevents allergies and inflammation.

https://m.jci.org/articles/view/45041

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5548235/

http://www.townsendletter.com/June2013/helico0613.html#.WM1yDBl_6Pw.facebook

We also have protozoa that are part of our gut microbiome and protect us.

https://www.nature.com/articles/srep25255

Our gut bacteria protect us from toxins. So if we are lacking them we lose that protection.

https://www.researchgate.net/publication/312447778_Lactobacillus_plantarum_CCFM639_can_prevent_aluminium-induced_neural_injuries_and_abnormal_behaviour_in_mice

http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0151190

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5770549/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5243131/

Our gut bacteria has been linked to TMAO disorder. Fish smell disorder. Causes the urine and body odor to have a fishy smell.

http://mbio.asm.org/content/6/2/e02481-14.full

Eating the right foods reduces TMAO.

https://www.cell.com/cell/fulltext/S0092-8674(15)01574-3?code=cell-site

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4817264/

High TMAO levels can cause chronic illness.

https://link.springer.com/article/10.1007/s10157-015-1207-y

https://www.ncbi.nlm.nih.gov/pubmed/21778036

Vaccinations cause a change in our protective bacteria making us lose protection from illness.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4678663/

Our gut bacteria has been linked to liver disease.

https://www.sciencedirect.com/science/article/pii/S2212877816300564

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5835615/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4229528/

If the bacteria get out of balance bladder dysbiosis can develop resulting in interstitial cystitis.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5300856/

https://www.nature.com/articles/srep26083

Viruses are a part of our commensal microbiome and help protect us.

https://www.ncbi.nlm.nih.gov/pubmed/29378882

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5923452/

http://jvi.asm.org/content/89/4/1951.full

Lacking certain gut bacteria is the reason we get food poisoning.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5198571/

We have commensal yeast. Taking this one helped me a lot.

https://www.healio.com/gastroenterology/irritable-bowel-syndrome/news/online/{bb454dd3-01bf-4720-a01e-912c62d09062}/probiotic-yeast-improves-abdominal-pain-bloating-in-ibs-c-patients

We have friendly fungus that protects us.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4332855/

Our gut bacteria protect us from cancer.

https://www.ncbi.nlm.nih.gov/pubmed/26884164

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6000254/

https://medicalxpress.com/news/2017-09-probiotics-treatment-colon-cancer.html

Our gut bacteria regulate our T cells which would prevent autoimmunity and allergies.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5983956/

https://www.ncbi.nlm.nih.gov/pubmed/25157157

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5833122/

http://iai.asm.org/content/86/4/e00934-17.long

Our diet effects our gut bacteria and vice versa.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5544775/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4535385/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4672356/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5852779/

This in turn effects our health.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5896394/

Spore based probiotics help heal leaky gut. So does E Coli Nissle 1917.

https://www.wjgnet.com/2150-5330/full/v8/i3/117.htm

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5156689/

Even our oral microbiome can effect the health of our whole body.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4346134/

https://www.ncbi.nlm.nih.gov/pubmed/26838600

https://www.ncbi.nlm.nih.gov/pubmed/27778343

Our gut bacteria has been linked to MS.

https://www.nature.com/articles/ncomms12015

Our gut bacteria has been linked to chronic fatigue syndrome.

https://www.sciencedaily.com/releases/2016/06/160627160939.htm

https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-016-0171-4

Notice the metabolic pathways in this study are all ones that are regulated by our gut bacteria.

http://www.pnas.org/content/113/37/E5472.short

Gut bacteria regulate our cholesterol levels.

https://link.springer.com/article/10.1007%2Fs13167-017-0117-3

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2904929/

They use scare tactics to get us to fear viruses but they also protect us.

https://www.asm.org/index.php/asm-newsroom2/press-releases/93495-viruses-you-ve-heard-the-bad-here-s-the-good

Now the part that kind of creeped me out. Even parasitic worms can be used to heal the gut.

https://www.nourishingplot.com/2017/05/23/beneficial-worms-and-bacteria-for-a-healthy-microbiome/

http://science.sciencemag.org/content/352/6285/608

Our gut bacteria will produce vitamins for us if we give them the right nutrients.

https://www.sciencedirect.com/science/article/pii/S0308814617308154?via%3Dihub

https://link.springer.com/article/10.1007%2Fs00394-017-1445-8

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5605934/

https://hsrc.himmelfarb.gwu.edu/smhs_microbio_facpubs/295/

https://nutritionsciencefactcheck.com/2014/12/28/the-metabolism-of-plant-lignans-via-human-intestinal-microbiota/

Probiotics help with aging.

https://www.hindawi.com/journals/bmri/2017/5939818/

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3156754/

Some gut bacteria feed others.

https://www.nature.com/articles/srep13548

Our appendix houses backup stores of our microbiome. Antibiotics kill them making us more prone to appendicitis.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3769896/

Appendectomies increase our risk of kidney disease.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6004103/

Appendectomies increase our risk for infection.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5447260/

https://www.ncbi.nlm.nih.gov/pubmed/17936308

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5011360/

Things that help with IBS.

https://www.hindawi.com/journals/mi/2015/628157/

A link to a study earlier mentioned how our microbiome regulate our zonulin levels. When things get through out of wack it can effect the whole body .

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5214347/

Herbal therapy has been shown to be very effective against SIBO. This would keep the good gut bacteria from being killed by antibiotics.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4030608/

Gut dysbiosis can result in gall stones.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3851472/

It can also result in cardiovascular disease.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5579652/

If we do not get enough fiber our gut bacteria will digest our mucous membrane making us prone to infection.

https://www.cell.com/cell/fulltext/S0092-8674(16)31464-7

Our gut bacteria is even linked to our endocanabinoid system.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2925525/

Drink a little red wine and our gut bacteria will lower oxLDL.

https://www.ncbi.nlm.nih.gov/pubmed/25738317

Our gut bacteria is involved in the regualtion of bile acids. If we do not get enough bile we get constipate to much bile and we will get diarrhea.

https://www.ncbi.nlm.nih.gov/pubmed/7288282

https://rd.springer.com/article/10.1007/BF02773728

Bile acid issues have been connected to NAFLD.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4874546/

Those with sickle cell have gut dysbiosis.

https://sicklecellanemianews.com/2017/11/16/study-links-pain-in-sickle-cell-disease-to-increase-in-a-type-of-gut-bacteria/

Candida Myths busted.

There are many myths about candida for example you should alkalize the body to fight it. If you do that you will feed it and many other pathogens. Our bladder and digestive system is supposed to be acidic. When you alkalize them which is very hard then you would be feeding candida. When we get high ammonia levels from metabolic issues or from gut dysbiosis it alkalizes our bladder and digestive system causing candida to go from a friendly fungus we need to a pathogenic form. To get it back to the friendly form we need to fix the metabolic issues or the any other number of issues that can cause high ammonia levels. Once Candida is in the pathogenic form it will raise the PH to an alkaline one and it does it in a very short period of time.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3101780/#

https://www.theguthealthprotocol.com/wp/the-alkalizing-myth

https://academic.oup.com/femsyr/article/15/7/fov081/641997

https://link.springer.com/chapter/10.1007/978-1-4757-3021-0_18

https://www.candidaplan.com/10-candida-myths-2/

https://restormedicine.com/digestive-health-candida/

If you are dealing with candida brewers yeast helps a lot. Candida is not in the yeast family, that is another myth that if you eat yeast you will feed candida. The opposite is true, brewers yeast gets candida back to commensal.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5354225/

Burdock root also helps with candida.

https://www.yeastinfectionadvisor.com/burdockroot.html

I used the things in this article and they also helped.

http://naturalsociety.com/suffering-candida-overgrowth-signs-prevention-solutions/

Mushrooms help with candida.

https://owndoc.com/candida-albicans/mushrooms-fungi-molds-candida/

Biotin helps with candida.

http://ericbakker.com/biotin-for-candida/

Uva Usa helps with a lot of things but I have not had a chance to research the safety of long term or high does usage.

https://www.sigmaaldrich.com/life-science/nutrition-research/learning-center/plant-profiler/arctostaphylos-uva-ursi.html?cm_mmc=SocialSharing-_-Facebook-_-Links-_-/content/sigma-aldrich/global-home/global/en/life-science/nutrition-research/learning-center/plant-profiler/arctostaphylos-uva-ursi

There is a lot of confusion concerning candida and gut dysbiosis.

http://www.holistichelp.net/blog/candida-sibo-or-h-pylori/

Nutrients needed when fighting candida.

http://www.orthomolecular.org/library/jom/1985/pdf/1985-v14n01-p050.pdf

http://www.ei-resource.org/articles/candida-and-gut-dysbiosis-articles/the-candida-aldehyde-detox-pathway-and-the-molybdenum-connection/

Candida can cause sugar cravings.

http://www.arltma.com/Newsletters/SugarCarbNews.htm

Omega 3 is needed but Omega 6 must be avoided to prevent endotoxemia.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4650612/

These links speak about the benefits of various probiotics.

http://salernocenter.com/2012/10/probiotic-benefits/?utm_campaign=shareaholic&utm_medium=facebook&utm_source=socialnetwork

https://www.statnews.com/2016/04/15/drugs-gut-microbiome

http://mbio.asm.org/content/6/2/e02481-14.full

Microbiome is transferred between sexual partners.

https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-016-0161-6

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3225992

https://academic.oup.com/aje/article/156/12/1133/151795/Uropathogenic-Escherichia-coli-Are-More-LikelyUropathogenic-Escherichia-coli-Are-More-Likely

http://ispub.com/IJID/8/2/6466

Our diet can change our gut microbiome and cause inflammation.

https://www.ncbi.nlm.nih.why-yogurt-and-probiotics-make-you-fat-and-foggywhy-yogurt-and-probiotics-make-you-fat-and-foggy

https://www.ncbi.nlm.nih.gov/pubmed/2current

https://www.ncbi.nlm.nih.gov/pubmed/21497805

Some microbiome can cause weight gain.

https://blog.bulletproof.com/why-yogurt-and-probiotics-make-you-fat-and-foggywhy-yogurt-and-probiotics-make-you-fat-and-foggy

There are probiotics that increase hormones such as oxytocin which helps with depression and healing.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4809651

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5597586

https://www.ncbi.nlm.nih.gov/pubmed/abstract

https://www.ncbi.nlm.nih.gov/pubmed/25803901

https://www.ncbi.nlm.nih.gov/pubmed/24021287

You have to balance your gut microbiota. To much of one or another can cause problems.

http://www.probioticscenter.org/bloating-and-probioticsgov

if we lose some strains of bacteria it can cause TMAO disorder.

http://mbio.asm.org/content/6/2/e02481-14.full

These are the probiotics that help me with my dairy issues.

http://www.sciencedirect.com/science/article/pii/S0023643812000503

http://www.sciencedirect.com/science/article/pii/S0963996912000890

http://pubs.acs.org/doi/abs/10.1021/acs.jafc.6b00714?journalCode=jahttp

For those with interstitial cystitis and urinary issues you need the right probiotics.

https://www.hindawi.com/journals/au/2009/680363

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4285709

http://www.tandfonline.com/toc/zmeh20/current

I had difficulty eating fruit. Probiotic yeast helped correct that.

https://www.healio.com/gastroenterology/irritable-bowel-syndrome/news/online/%7Bbb454dd3-01bf-4720-a01e-912c62d09062%7D/probiotic-yeast-improves-abdominal-pain-bloating-in-ibs-c-patients

Our gut microbiota protects us from toxins.

https://www.researchgate.net/publication/312447778_Lactobacillus_plantarum_CCFM639_can_prevent_aluminium-induced_neural_injuries_and_abnormal_behaviour_in_mice

Peroxisomes help recycle reactive oxygen species which protects our cells from damage. Some microbiome produce peroxisomes.

http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0117851

Many food additives has negative effects on the gut microbiome which effects the body.

http://www.nature.com/nature/journal/v519/n7541/full/nature14232.html

You have to balance your gut microbiota. To much of one or another can cause problems.

http://www.probioticscenter.org/bloating-and-probioticsgov

Because our microbiome regulates gene expression antibiotics that kill our gut microbiome causes gene damage.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5339702

Our microbione regulates inflammation in our bodies.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3744517

Some protect us from tick born illness.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5097911

Antibiotics and toxins also destroy the gut microbiome that protects us from pathogens.

http://www.discoverymedicine.com/Paul-D-Cotter/2012/03/15/the-impact-of-antibiotics-on-the-gut-microbiota-as-revealed-by-high-throughput-dna-sequencing

https://detoxproject.org/glyphosate/glyphosate-and-roundup-negatively-affect-gut-bacteriaglyphosate-and-roundup-negatively-affect-gut-bacteria

Those prone to urinary tract infection have been shown to have a microbiome imbalance.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2684288

http://m.pnas.org/content/111/36/13145.absshort

https://www.ncbi.nlm.nih.gov/pubmed/21412185

They protect us from cavities.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4346134

Some microbiome make vitamins that are needed.

https://www.ncbi.nlm.nih.gov/pubmed/2855html

They falsely claim some bacteria are pathogenic but they are needed to protect us.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4988121

http://mbio.asm.org/content/5/6/e01817-14.short

http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0107758

https://www.ncbi.nlm.nih.gov/pubmed/21778036

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC414html

Gut dysbiosis is a major cause of arthritis

https://arthritis-research.biomedcentral.com/articles/10.1186/s13075-014-0486-0

Our bodies secrete an enzyme FUT2 that keeps our microbiome healthy. It also helps modulate our immune system. Many things now days can inhibit this enzyme and in some completely disable their ability to produce FUT2 Enzymes. The result can be autoimmune dysfunction and we will not be able to establish a healthy colony of gut microbiome.

http://www.nature.com/ismej/journal/v8/n11/full/ismej201464a.html

http://www.traceyreed.ca/blog/2016/4/12/fut2s-role-in-gut-healths-role-in-gut-health

There are two things that help with a FUT2 non secretor. Take a symbiotic that contains an ologosaccharide or a probiotic that produces What you need.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3800993

http://www.newhope.com/ingredients/oligosaccharides-revealing-more-health-benefitsoligosaccharides-revealing-more-health-benefits

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3516493

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3840232

Here is a good article on various diseases and microbiota.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4351195

The probiotic we use has to be unique to what issues we are dealing with.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4156804

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3760697

https://www.ncbi.nbloating-and-probioticsgov

Probiotics and cancer. It is better to prevent cancer. Many who have cancer have been found to have acidosis which indicates an underlying health is. That can be from metabolic issues, leaky gut, toxins especially heavy metals and the BT Toxins found in GMOs and the herbicide used on it glyphosate. All those can cause leaky gut which can cause high histamines which also leads to acidosis. Cancer has also been found to create it’s own micro acid environment. Keeping our gut balanced protects us from cancer and many other illnesses. This can also lead to acidosis from dybiosis or akalosis (hyperammonemia)from fungal infection which also causes cancer.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5397731

Even type 1 diabetes has been linked to the gut.

https://www.sciencedirect.com/science/article/pii/S1931312815000219

Opium Lettuce helps with spastic colon.

http://europepmc.org/articles/PMC3638630

Those who have issues with their digestion that causes the food to sit and ferment instead of digesting properly my not want to use apple cider vinegar. It delays digestion even more.

https://www.ncbi.nlm.nih.gov/pubmed/18093343

https://www.sciencedirect.com/science/article/pii/S0378874106001565?via%3Dihub